Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01414 ATGGAGTTTTTGCTAAGTTCTATCCTCTTACTTATATTACCATTCACTCTCTATTTTCTACTTTCAAAATGCACAAAAAACATGATCAAACTTCCACCAGGACCTACTCCTCTTCCTTTTATAGGAAACCTCCATCAATTAGGAAAAAAGCCTCACAAATCCTTAGCCAGATTAGCTGAAATTCATGGTCCACTCATGAGTCTTAAGTTAGGCCAAGTAACAACCATTGTTGTATCTTCATCCAACATGGCCAAACAAATACTCCAAACACATGATAATATCTTATCTAACAGAACCATTCCCGATGCTGTAAAAGTTCATGACCACCACAAATACAACATGGCATTCCTACCAATTGCACCTCTATGGAGAGAGTTAAGAAAAATATGCAATAATCAATTATTCTCTAGCAAAATACTTGATGAGAGTAAGGGAATCAGGCTTCAGAAACTGAAAGATTGTCTCAACGATATTAATCAAACTAGTCTTATTAATGAAGCTGTTAATATTGGAGATATGGTTTTCAAGACATCAATCAATTTGTTGTCAAACATTATTTTCTCGGTAGATTTGGTCCAACCTGGTGATTCAGTAGAAGATTTTAAGGAGCTAATTTTGAATATATTGAAAGAGTGTGGAAAACCAAACATTGCTGATCTTTTTCCTGCTTTAAATATGTTTGACTTTGATCTACAAGGTATTAAAGGACGTAACGCTGTTCATGCTCAGAAGGTCCTTGATATCTTTCAACGTTTAGTTGACGAAAGATTGAAGCTGAGGGAAGTACAAGGTTTTGACACAAACAATGACATGCTAAGTAACTTGCTCAATATGGCTCAAGACAACAACCAAGAAATGAACATTGCCAAAATTCCACATTTATCTCTGACTTTATTTATTGCTGGAACGGATACAATTTCATCTACGCTTGAATGGGCAATGGCAGAATTGCTCAAAAATGAAAATATTATGTCAAAAGCAAAACAAGAGTTGGAACAAATTATTGGCAAAGGTAAACCAGTTGAAGAAACCGATATTGTTAAGCTTCCTTATTTACAAGCAATAATAAAAGAGACATTTAGATTGCACCCTTCTGTTCCATTTTTAGTCCCTCGAAAAGCCAATGCAAATGTGGAAATTGATGGCTACACAATCCCAAAAGATGCACAAATTTGGGTCAATGTCTGGGCTATTGGTAGAAATTCAAGTGTTTGGGAAAATGCAAATTTGTTTTCACCAGACAGATTCTTAAATTCTGAAATTGATGCTAAAGGTCACAATTTCGAGCTTCTACCATTTGGCGCTGGAAGGAGAATTTGTCCCGGTTTACCGTTAGCCACCAAGATGTTACATTTGATGTTGGGTTCATTTATCAATTGTTTTAACTGGAAATTACAAGATGGAATGAAAATACAAGATATGAACATGGATGATAAGTTTGGACTATCATTAGAGAAGTCTCAGCCGCTAAGAGTTGTTCCACAAAGAATATGCAACTAG 1500 0.3547 MEFLLSSILLLILPFTLYFLLSKCTKNMIKLPPGPTPLPFIGNLHQLGKKPHKSLARLAEIHGPLMSLKLGQVTTIVVSSSNMAKQILQTHDNILSNRTIPDAVKVHDHHKYNMAFLPIAPLWRELRKICNNQLFSSKILDESKGIRLQKLKDCLNDINQTSLINEAVNIGDMVFKTSINLLSNIIFSVDLVQPGDSVEDFKELILNILKECGKPNIADLFPALNMFDFDLQGIKGRNAVHAQKVLDIFQRLVDERLKLREVQGFDTNNDMLSNLLNMAQDNNQEMNIAKIPHLSLTLFIAGTDTISSTLEWAMAELLKNENIMSKAKQELEQIIGKGKPVEETDIVKLPYLQAIIKETFRLHPSVPFLVPRKANANVEIDGYTIPKDAQIWVNVWAIGRNSSVWENANLFSPDRFLNSEIDAKGHNFELLPFGAGRRICPGLPLATKMLHLMLGSFINCFNWKLQDGMKIQDMNMDDKFGLSLEKSQPLRVVPQRICN 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01414 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Vifa6g01414 499 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01414 499 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01414 499 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01414 499 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01414 499 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01414 499 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01414 499 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01414 499 Pfam Cytochrome P450 32 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01414 499 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01414 499 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01414 499 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01414 499 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01414 499 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 9 495 - -
Vifa6g01414 499 CDD CYP76-like 59 494 - -
Vifa6g01414 499 FunFam Cytochrome P450 76C4 23 493 - -
Vifa6g01414 499 Gene3D Cytochrome P450 20 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01414 499 SUPERFAMILY Cytochrome P450 32 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01414 Vifa-Chr6 515985375 515986958 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01414 1 494 Cytochrome P450 AT2G45550 41.502 5.58e-149 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01414 - - lja:Lj0g3v0208479.2 635.95