Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01399 ATGATAAGTGCAAAAAGGGTGATAGAAATGGCAAAAAAGTGGCATAAAATGGCAGTTCAAAGACGCAGGAGGATCTCATACCTTAGAAATGAAGTGGATTTCAAGTCTTCGGCGGTAAATAAGGGTCACTTTGTTGTTTACAGCATGGATCGTAAGCGGTTTGTGGTTCCTCTAGAATATCTTAACACAAACGTGTTTAGAGAACTCTTTAAATGGTCCGAAGAAGTGTTCGGGTTACCTGGGAATAGACCTATCATGTTGCCTTGTGATAGTGTTTTCTTGAACTATGCAATCTTGTTAGTTCAAGAACGGATTCCTGAAGATGTTGAGAAAGCTTTGATCGTTTTCATGTATGCTTGTGACAATAAGGCATCCTCTAATTCCTATCATGATGTTGGGCAAAAAAATGAACAAATTATTATCTATGGCTTTTGA 435 0.3793 MISAKRVIEMAKKWHKMAVQRRRRISYLRNEVDFKSSAVNKGHFVVYSMDRKRFVVPLEYLNTNVFRELFKWSEEVFGLPGNRPIMLPCDSVFLNYAILLVQERIPEDVEKALIVFMYACDNKASSNSYHDVGQKNEQIIIYGF 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01399 144 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 128 IPR003676 GO:0009733
Vifa6g01399 144 Pfam Auxin responsive protein 12 99 IPR003676 GO:0009733
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01399 3 101 Calmodulin-binding Proteins AT4G34750 30.000 1.65e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01399 - - ccaj:109798531 183.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g01399 6 510682553 510682987 Vifa6g01399 6 510682553 510682987 ECH