Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01363 ATGGTGAAGTTGATGAAAAAGATGGATAGCTTTCTTCAGAAGCTAGTTGATGAGAAACGAAGAAATTGGAGCAATGGCCAAAGAAATATGACGTTGATTGATGTTATGTTAGACTTACAACAAAAGGAACCAGAATTCTACACTGAGGAGATTGTGAAAGGTGTTGTTCTGATTATGCTTATAGCTGGCTCTGAAACTTCAGCTAGAACTATGGAATGGGCACTCTCACTTCTCCTCAACCATCCAGAAATAATGAATAAGGTTAGGGCAGAGATAAACAATGTTGTGAATCAAGATCATCTTATGAATGAATCAGAGGCTTCAAAACTAAAATACTTACAAAATGTAATTATGGAGGCACTTCGTTTATACCCCGTGACTCCAATGTTGATACCACACGAGTCCTCCAATGATTGCAATGTTTGTGGTTTTGATGTACCAAAAGGGACAATACTTCTCGTGAATCTTTGGACTCTACATAGGGACCCTAACTTATGGGTGGATCCAACAAGATTTGTGCCTGAAAGGTTTGAAGAAAGGGGGTTAGATAGTGAAATTTACAATATGCTTCCATTTGGTGTTGGAAGGAGAGCTTGTCCTGGATCTGTTTTAGCAAAACGTTTTTTGGCAAATGCAATAGCGTCTTTGATTCAATGTTTTGAGTGGGAAAGAATTGGAAATGAAGAAATTGACATGACTGAGGGAATAGGTATTACAATGCCTAAAGTTGAACCTTTGATTGCTTTATGCAGGCCACGCCAAGTTATGGTAAATCTTCTCTCGAATATATAA 792 0.3801 MVKLMKKMDSFLQKLVDEKRRNWSNGQRNMTLIDVMLDLQQKEPEFYTEEIVKGVVLIMLIAGSETSARTMEWALSLLLNHPEIMNKVRAEINNVVNQDHLMNESEASKLKYLQNVIMEALRLYPVTPMLIPHESSNDCNVCGFDVPKGTILLVNLWTLHRDPNLWVDPTRFVPERFEERGLDSEIYNMLPFGVGRRACPGSVLAKRFLANAIASLIQCFEWERIGNEEIDMTEGIGITMPKVEPLIALCRPRQVMVNLLSNI 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01363 263 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 192 201 IPR017972 GO:0005506|GO:0016705
Vifa6g01363 263 Pfam Cytochrome P450 3 243 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01363 263 PRINTS E-class P450 group I signature 155 179 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01363 263 PRINTS E-class P450 group I signature 114 132 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01363 263 PRINTS E-class P450 group I signature 51 68 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01363 263 PRINTS E-class P450 group I signature 71 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01363 263 PRINTS E-class P450 group I signature 199 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01363 263 PRINTS E-class P450 group I signature 189 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01363 263 PRINTS P450 superfamily signature 115 126 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01363 263 PRINTS P450 superfamily signature 199 210 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01363 263 PRINTS P450 superfamily signature 190 199 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01363 263 PRINTS P450 superfamily signature 62 79 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01363 263 Gene3D Cytochrome P450 1 249 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01363 263 PANTHER CYTOCHROME P450 82C3-RELATED 1 254 - -
Vifa6g01363 263 SUPERFAMILY Cytochrome P450 2 253 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01363 Vifa-Chr6 469245503 469262496 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01363 3 261 Cytochrome P450 AT5G36220 52.510 1.30e-101 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01363 - K13260 gmx:100794610 397.127