Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01327 ATGGAGTTTTTGCTAAGTTCTACGATCCTCTTACTTCTATTACCATTCACTCTCTACTTTCTACTTTCAAAATGCACAAAAAACATGATCAAACTTCCACCAGGACCTACTCCTCTTCCTTTTATAGGAAACCTCCATCAATTAGGAAAAAAGCCTCACAAATCCTTAGCCAAATTAGCTGAAATTCACGGTCCACTCATGAGTCTTAAGTTAGGCCAGGTAACAACCATTGTTGTATCTTCACCCAACATGGCCAAACAAATACTCCAAACACATGATAATATCTTATCTAACAGAACCATTCCCGATGCTGTAAAAGTTCATGACCACCACAAATACAACATGGCGTTCTTACCAATTGCACCTCTTTGGAGAGAGTTAAGAAAAATATTCAATAATCAATTATTCTCTAGCAAAACACTTGATGAGAGTAAGGGAATCAGGCTTCAGAAACTGAAAGATTGTCTCAACGATATTACTCAAACTAGTCTTACTAATGAAGCTATTAATATTGGAGATATGGTTTTCAAGACATCAATTAATTTGTTGTCAAACACTATTTTCTCTCTAGATTTGGTTCAACCTGGTGATTCAGTAGAAGATTTTAAGGAGCTAATTTTGAATATATTGAAAGAGTGTGGAAAACCAAACATTGTTGATCTTTTTCCTGCTATAAATATGTTTGACTTTGATCTACAAGGTATTAAAGGACGTAACGCTGTTCATGCTCAGAAGGTCCTTGATATCTTTCAACGTTTAGTTGACGAAAGATTGAAGCTGAGGGAAGTACAAGGTTTTGACACAAACAAAGACATGCTAAGTAACTTGCTCAACATGGCTCAAGACAACAGCCAAGAAATGAACATTGCCAAAATCCCACATTTATTTCTGACTTTATTTATTGCTGGAACGGATACAATTTCATCTACGCTTGAATGGGCAATGGCAGAATTGCTCAAAAATGAAAATATTATGTCAAAAGCAAAACAAGAGTTAGAACAAATCATTGGCAAAGGAAAACCAATTGAAGATTCAGATATTGTTAAGCTTCCTTATTTACAAGCAATAATAAAAGAGACATTTAGACTACACCCTTCGGTTCCATTTTTACTTCCTCGAAAAGCCAATGCAAATGTGGAAATTGATGGCTACACAATCCCAAAAGATGCACAAATTTGGGTCAATGTGTGGGCTATTGGTAGAAATTCAAGTGTTTGGGAAAATGAAAATTTGTTTTCACCGGACAGATTCTTAAATTCTCAAATTGATGCTAAAGGTCACAATTTCGAGCTTCTACCATTTGGCGCTGGAAGGAGAATTTGTCCTGGTTTACCGTTAGCGACCAAGATGTTACATTTGATGTTGGGTTCATTTATCAATTGTTTTAACTGGAAATTACAAGATGGAATCAAAATACAAGATATGAACATGGAGGACAAATTTGGACTATCATTAGAGAAGTCTCAGCCGCTAAGACTTGTTCCACAAAGAATATGCAATTAG 1503 0.356 MEFLLSSTILLLLLPFTLYFLLSKCTKNMIKLPPGPTPLPFIGNLHQLGKKPHKSLAKLAEIHGPLMSLKLGQVTTIVVSSPNMAKQILQTHDNILSNRTIPDAVKVHDHHKYNMAFLPIAPLWRELRKIFNNQLFSSKTLDESKGIRLQKLKDCLNDITQTSLTNEAINIGDMVFKTSINLLSNTIFSLDLVQPGDSVEDFKELILNILKECGKPNIVDLFPAINMFDFDLQGIKGRNAVHAQKVLDIFQRLVDERLKLREVQGFDTNKDMLSNLLNMAQDNSQEMNIAKIPHLFLTLFIAGTDTISSTLEWAMAELLKNENIMSKAKQELEQIIGKGKPIEDSDIVKLPYLQAIIKETFRLHPSVPFLLPRKANANVEIDGYTIPKDAQIWVNVWAIGRNSSVWENENLFSPDRFLNSQIDAKGHNFELLPFGAGRRICPGLPLATKMLHLMLGSFINCFNWKLQDGIKIQDMNMEDKFGLSLEKSQPLRLVPQRICN 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01327 500 Gene3D Cytochrome P450 21 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01327 500 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 10 496 - -
Vifa6g01327 500 Pfam Cytochrome P450 33 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01327 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Vifa6g01327 500 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01327 500 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01327 500 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01327 500 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01327 500 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01327 500 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01327 500 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01327 500 FunFam Cytochrome P450 76C4 24 494 - -
Vifa6g01327 500 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01327 500 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01327 500 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01327 500 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01327 500 SUPERFAMILY Cytochrome P450 33 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01327 500 CDD CYP76-like 60 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01327 Vifa-Chr6 459162232 459163824 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01327 1 495 Cytochrome P450 AT2G45550 39.921 5.46e-147 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01327 - - lja:Lj0g3v0208479.2 627.861