Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01313 ATGGCTAGCCATGAATCAATGTGTCCAAAACCAATGAAAGCCACTTCCAATGGGGCATTTCAACATGAAAACCCAATGGATTATGCACTTCCTTTGTTGATTGTTCAGATATGTTTGGTGGTTGCTTTTACAAGATTCATTGCATTTCTTTGCAAGCCTCTTAGACAACCTAGAGTTATTGCAGAAGTCATTGGAGGAATATTACTAGGACCATCAGCAATTGGGAGGAACAAGAGATTTCTAGAGATATTTTTTCCTGAAAGAAGCTTAACGGTTCTTGAAACAGTAGCCAACGTTGGCCTTCTATTTTTCTTATTTCTAGTAGGTCTTGAACTGGACATGCGTTCGATACGCAGAACAGGTACAAAAGCCTTATGCATAGCCCTTGCTGGGATCAGTGTCCCATTTGTACTTGGCATAGGCACTTCAGTTGTTCTTCGCCACACGATATCCAAAGATGTTAATTCAGCTGCCTTCCTCGTATTCATGGGTGTTTCTCTTTCGATTACCGCCTTTCCTGTCCTCGCTCGCATCCTAGCTGAGCTGAAACTCCTTACAACCGATGTTGGCCGTATGGCAATGTCTGCTGCTGCTGTCAATGATGTTGCAGCATGGATACTACTTGCTCTTGCCATTGCTCTTTCGGGATCAAACACTTCCCCTCTTATTTCCTTGTGGGTCCTGCTCTGTGGTGCCGGTTTTATCGTCTTTGTTATTGTAGCTGTAAAGCCTTTACTCGCATTGATGGCTAAACATTCCCCTGAGGGTGAACCTGTGAGGGAGATTTACATTTGCATCACCTTGACAATTGTTTTGGCTTGTAGTTTCATAACTGATACTATTGGTATTCATGCACTTTTCGGAGCTTTTGTAGCTGGAATTGTTGTTCCTAAAGATGGTCCTTTCGCGTCTGTTTTGACCGAAAAGATTGAAGATCTTGTTATGAGTCTTTTGTTGCCACTTTATTTTGTGTCTAGTGGATTGAAGACTAATGTGGCTACTATAAGTGGAGGAATGTCTTGGGCACTATTAATCCTTGTTATATTTAATGCTTGCGTTGGTAAAATTGTTGGTACTCTTTCTGTGTCCTTGTTGTGTAAAGTGCCTTTTAGAGAAGCATTGACCCTTGGATTTCTCATGAACACCAAGGGCTTAGTGGAACTTATTGTTCTCAACATTGGCAAGGATCGCAAGGTACTGAATGATCAAGCATTTGCAATATGTGTTTTAATGGCATTGTTCACCACTTTCATCACCACACCTATAGTGATGGCACTATACAAACCTGCTAGGAAAGGAACACCTTACATGATTAAAACAGTTCAGCGCAAAGATCCAGACACAGAACTTCGAATTCTAGCTTGCTTCCACAGCACATGGAACATTCCCACATTAGTCAATCTAATAGAATCTTCAAGAGGAACACGAAAGCGAGGAAGATTATGTATATACGCAATGCATCTAATGGAACTCTCTGAAAGACCTTCTGCCATAACAATGGTTCATAAGGCTAGAAACAATGGCCTGCCCTTCTGGAACAAAAAACAAAGCGACAACAACAATGATCAAATGGTAATCGCGTTTCAAGCTTACGGACATCTAACTAGCGTTAATGTCCGTTCAATGACAGCAATTTCGTCGTTGAATAACATCCATGAAGACATCTGTTCAAGTGCTCACCAGAAGCGAGTCGCGATGATTCTACTCCCGTTCCATAAGCACCAGCGTGCTGATGGAATCATGGAGTCACTAGGCCAATCTTTCCGCATAATGAATGGCCTTGTACTCAGTCACGCTCCCTGCTCGGTTGGAATTTTGGTCGACCGCGGCCTTGGAGGGACAAGTCAAGTTCATGCTAGTGACGTTTCTTACAATGTTGTTGTACCTTTCTTTGGAGGATGCGACGACCGTGAAGCACTGGCGTACGGTATGAGAATGGCTGAACATCCGGGGATTTATCTAACTGTTATCAAGTTCATTACTCCACCAGGGAAAACACTGGCATTCGGTGCTAAACTGATCGGTGTAGCAGCTGACGAGAATCGAAAAGTAATAAAAGTGGCTGATGATAGCACAGATGATGAAGATAAAAAAGAGGACAATCAATTCTGGTCAGAATTTATAAGTGTTTCTTGTAAGAGCGAAGAGTCTATAGTTTACGAGGAAAGGTTGGTGGATAGTAAAGACGATATTATAACTGTATTGAGGGAAAGGAACAAGAGCAATCTGATCTGTGTCGGTCGAATGCCTCCAGTAGTACCTTTGCTAGATGGAAGTGATTGTGCTGAGCTTGGTCCTGTTGGAAGCTATTTGGCATCTTCTGATTTCTCTACAATTGCATCAGTACTAGTTTTTCAGCAATACAATCCCAAGACAGATATTCATCCTTTGGTTATGGAGGTTTCTGATTATTCTGATATCCCTGACACACCAAGAGATGAAGTATAG 2448 0.4208 MASHESMCPKPMKATSNGAFQHENPMDYALPLLIVQICLVVAFTRFIAFLCKPLRQPRVIAEVIGGILLGPSAIGRNKRFLEIFFPERSLTVLETVANVGLLFFLFLVGLELDMRSIRRTGTKALCIALAGISVPFVLGIGTSVVLRHTISKDVNSAAFLVFMGVSLSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGSNTSPLISLWVLLCGAGFIVFVIVAVKPLLALMAKHSPEGEPVREIYICITLTIVLACSFITDTIGIHALFGAFVAGIVVPKDGPFASVLTEKIEDLVMSLLLPLYFVSSGLKTNVATISGGMSWALLILVIFNACVGKIVGTLSVSLLCKVPFREALTLGFLMNTKGLVELIVLNIGKDRKVLNDQAFAICVLMALFTTFITTPIVMALYKPARKGTPYMIKTVQRKDPDTELRILACFHSTWNIPTLVNLIESSRGTRKRGRLCIYAMHLMELSERPSAITMVHKARNNGLPFWNKKQSDNNNDQMVIAFQAYGHLTSVNVRSMTAISSLNNIHEDICSSAHQKRVAMILLPFHKHQRADGIMESLGQSFRIMNGLVLSHAPCSVGILVDRGLGGTSQVHASDVSYNVVVPFFGGCDDREALAYGMRMAEHPGIYLTVIKFITPPGKTLAFGAKLIGVAADENRKVIKVADDSTDDEDKKEDNQFWSEFISVSCKSEESIVYEERLVDSKDDIITVLRERNKSNLICVGRMPPVVPLLDGSDCAELGPVGSYLASSDFSTIASVLVFQQYNPKTDIHPLVMEVSDYSDIPDTPRDEV 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01313 815 Gene3D - 32 434 IPR038770 -
Vifa6g01313 815 Pfam Sodium/hydrogen exchanger family 38 422 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vifa6g01313 815 PANTHER CATION/H + ANTIPORTER 7 789 - -
Vifa6g01313 815 FunFam Cation/H(+) antiporter 15 32 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01313 Vifa-Chr6 456980229 456983780 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01313 8 809 Antiporter Super Family AT3G17630 68.859 0.0 1090
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01313 K26731 - gmx:100818975 1288.86