Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01257 ATGGAGATTGAATTAATTTCTAGAGAAACTATCAAACCTTCATCACCAACTCCATCTGATTTGAGAATATACCCTCTTTCTTTTATTGATAACGCTTTTTACCGTAAATATGTGCCAGTTCTTTTCTTTTACAACCCAAACCAAGTTAGTAACCAAACTTCAAAAATATCACAACTCCGAAAATCCCTGTCTCATGTTCTTTCCAAATACTACCATTTTGCTGGTAGATTGAAAGACAAAACTACCATTGAATGCAATGATCAAGGTGTGTCATTTTTCATCACAAAGATACAAAACAATTTATCAGAAATCATCCAAAACCCCACAGAAGAATTGGTGAACCCTTTGTTCACCGACGAATTACAATGGAAAGTGATGGATTGGAGCGGTAGTTTATTTGTCATTCAAATTAACTGTTTTGCGTGTGGAGGAATTGCGATTAGTATTCTCATGACTCATAAGGTTGGTGATGGTACCAGTCTTTTCAAATTCTTGAATGACTGGGCCATCATCAACCAAAAACTAGAACGAGAAGAAAAATTATCAATATTTTTATCAACTCTTTCTGGAGGAGCTTCGATTTTCCCCCAGAGAGAGATACCTATTTTTCCGGAACTTGCTATTCCAGGAGGAAACAACATAGTGTATAAAAGATTCGTCTTTGAAGCCTCAAAGATTAAGTGTCTCAAGGAAAAGGTAAGAAATTCTGTGAATATTTCTCCGACACGCGTACAAGTTGTAAGTGCATTGATTTACAAGCGTGCGGTTTCAACAAAGGGATTAAATTTCAAGATTGCACCATTCACTACAGTTGTAGACATTCGCAGAAGAATGGTTCCTCCATTGTCAGCAAACTATGTCGGGAACTTGGTTTGGTTTGCATCTATGAGTCCAGATAAAGAGGAAATGGAGCTGGAGGAATTGGTAAGCAAGATAAAACAAGCATTATCTGGATTTTACGAGGTTTATCCGAAAAAATTTGAAGGGAAAGAAGAGGAGGATTCGTCATTCATTTCTGGATGTTTGGAACATCTTAATGATGGTTATTATGAGAATCATAATATGTATACTTTTAGTAGTTGGTGTGGATTTCCAGTATATGATGTAGATTTTGGGTGGGGAAAACCAACATGGGTAACCACTTTTGGTTGTTTGATGAAGAATCTAATATTTATGATGGATGCAAGAGATGGAGAAGGGATCGAAGCATTTGTGAGCATGGAAAAGAATGATATGGACAAGTTTGAAAATGATGTTGAGATTCTTCAATATGCATCTCTTAATCCAAGCAATGTTTGA 1299 0.3626 MEIELISRETIKPSSPTPSDLRIYPLSFIDNAFYRKYVPVLFFYNPNQVSNQTSKISQLRKSLSHVLSKYYHFAGRLKDKTTIECNDQGVSFFITKIQNNLSEIIQNPTEELVNPLFTDELQWKVMDWSGSLFVIQINCFACGGIAISILMTHKVGDGTSLFKFLNDWAIINQKLEREEKLSIFLSTLSGGASIFPQREIPIFPELAIPGGNNIVYKRFVFEASKIKCLKEKVRNSVNISPTRVQVVSALIYKRAVSTKGLNFKIAPFTTVVDIRRRMVPPLSANYVGNLVWFASMSPDKEEMELEELVSKIKQALSGFYEVYPKKFEGKEEEDSSFISGCLEHLNDGYYENHNMYTFSSWCGFPVYDVDFGWGKPTWVTTFGCLMKNLIFMMDARDGEGIEAFVSMEKNDMDKFENDVEILQYASLNPSNV 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01257 432 Gene3D - 211 426 IPR023213 -
Vifa6g01257 432 Pfam Transferase family 1 420 - -
Vifa6g01257 432 PANTHER F21J9.9 4 426 - -
Vifa6g01257 432 Gene3D - 1 201 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01257 Vifa-Chr6 410321946 410323244 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01257 1 416 Monolignol Biosynthesis Gene Families AT5G48930 23.767 9.32e-27 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01257 - - gmx:100806928 454.521