Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01150 ATGATTCAAAGAAAGGTTTGCGGTGAGCTTGGTATCCAAGCTGATCGTGTCAATTTTGACAAAGGCACAACAAACATGAAGGCACTTGAATCACCACCTCCGAGGAAGAGTTTATCTCAATCAAAAAAGATGTTACCTCTTCATGTTCCAACCACTGCAGCAACTGCACAAAAGCATAAGCCTTTGCTGAGAAAGTCACCCAATTACATGAAGCCTACCAGCAGTTCAGAAGCAAAAAAGGAGCTTTTACCGGTGAGTCTTCAGAATACCCAATTTGGCTCGGATGGTAAGAATCTGCCACAAAAAAGTTTGAGTAAGTCAAAATCTAGTTCTGCTACTTACAAAAAAACTGCAAAAATTATGTCAAGATCATCTAGTGTGAATTTGGTGAGAACATTAACGAAGACTCTTAGTTTTAAGCGAAGTAGAATTTGTCCGAGAAAATCTACGGCAATAGTGCTGCGTGCAGATATTAGTGCACCATACAGAGCTACCTGCTCTTCAACTTTGAAAGATTCCAAGTTCCCTGAACACCTCATGCTTAATACTGGAGGCAGTGAGTCAGAGGGAGCTTTGATAATGAAGGTTTGCCCATATATATATTGTTCTCTCAATGGAAATCACCATCCTCCAGAAAAGAGGCGCTTTTTCAAGACTCGGAAAAGTATAAAGCTGGAAGGTTCTGAAAAATTGAAGGTGCCTTGTGAGACAAGGAACGATTTTGATATTGAGCCGATTGTCTTTGATGGAAAACCTGCATGCGATGAAGCTGATAGGGGTAATCCAACAAGCATTACCTTAATACGAGAAATTGGTATAGATTTCTCTTTTCAAGTCAATGACAAGGAACGGGAAAAAGCATACAAAATGGGAAGAGCAGACGCTGTCAAAAACCTTGAGGATCAAGAAGGTATCAAGTTTGCAATGGAGGGGAATGGAAACATAGCAGAAGAGGAAGGTGTCTATCTAGTAAATCCTTATGTGCCTTGTGATCTCACCAAGTCTGAGATCAATCCCAAGGTGGAATTCAAAAACTACTTCGACGGTTCTGAAATTGAAGCCGAAACCAAGGAAAGTTTTCACCAAAAACTGAACGCAGAAGATTCAGACAAAAACCACCCACCTAACTGGTTTTATGAAGGAATATGTACTGGAACCTACATCCATGAGGTTAGCTATGATGAAGAACTCATGGAAAATATTGAATTGGATGATTCTAATTCCCAAGGTAAAGAAGAGAAAAACACATCTTTTGATGCACAACCTCGTGATACAAAATTTGTCCAAGAAAGCTCAAGTGAAAGCATACAGGCTGACTATCCGTCCAACGGCACTGATCATGAGTATGACCTACAGTATTTGAAAGAGGAAGAATTTCAGTTTCTGACAAACATAGAAGATAATGTTCGAGAAATTGAAAAGCATGTGGATAATGGGGCCAGTTGCACCTCGATGGTACTTGAAGAAGATACAGTTCACAATCGTGAAGCTCACAAGATCAGTGAAACTCACAAGATTGAAGAAAGTCGTGAAGATAGCAACACAAACCTAGAGAATAATGCTAAAGAAATTAGCCAAAGGAACCAAATTCTCTCATCTGATCTGCCCGGAGAAAGCTCCATTATAGCTCAGGACCACGAATTACTGGAGGAAGATCTAGTTACTGCTACTAAGTTCCAGACGATATGCTGCAAAGGTGGTGAAGGGCGGAACACAAGCAATAATTGGCAATCGCTAGCTAAGAACAAGAGAATTATTCAAGATGATGAGGAAATGAGAATGATCAAACCAAGAAAGCCAAATTTCCTGCCCTTGGTTCCTGATCCAAAACCAGAAAAGGTTGAACTGAGGCACCAAATGATAGACGACAGAAAAAATGCTGAGGAATGGATGCTTGATTTTTCACTCAGACAAGCTGTTACAAAACTTGCTCCAGCCAGGAAAAAGAAGGTTCCATTGCTTGTTGAAGCTTTTGAAACAGTAATGTCAACGTCGTAA 1998 0.4024 MIQRKVCGELGIQADRVNFDKGTTNMKALESPPPRKSLSQSKKMLPLHVPTTAATAQKHKPLLRKSPNYMKPTSSSEAKKELLPVSLQNTQFGSDGKNLPQKSLSKSKSSSATYKKTAKIMSRSSSVNLVRTLTKTLSFKRSRICPRKSTAIVLRADISAPYRATCSSTLKDSKFPEHLMLNTGGSESEGALIMKVCPYIYCSLNGNHHPPEKRRFFKTRKSIKLEGSEKLKVPCETRNDFDIEPIVFDGKPACDEADRGNPTSITLIREIGIDFSFQVNDKEREKAYKMGRADAVKNLEDQEGIKFAMEGNGNIAEEEGVYLVNPYVPCDLTKSEINPKVEFKNYFDGSEIEAETKESFHQKLNAEDSDKNHPPNWFYEGICTGTYIHEVSYDEELMENIELDDSNSQGKEEKNTSFDAQPRDTKFVQESSSESIQADYPSNGTDHEYDLQYLKEEEFQFLTNIEDNVREIEKHVDNGASCTSMVLEEDTVHNREAHKISETHKIEESREDSNTNLENNAKEISQRNQILSSDLPGESSIIAQDHELLEEDLVTATKFQTICCKGGEGRNTSNNWQSLAKNKRIIQDDEEMRMIKPRKPNFLPLVPDPKPEKVELRHQMIDDRKNAEEWMLDFSLRQAVTKLAPARKKKVPLLVEAFETVMSTS 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01150 665 MobiDBLite consensus disorder prediction 405 420 - -
Vifa6g01150 665 MobiDBLite consensus disorder prediction 421 442 - -
Vifa6g01150 665 MobiDBLite consensus disorder prediction 68 117 - -
Vifa6g01150 665 MobiDBLite consensus disorder prediction 23 117 - -
Vifa6g01150 665 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 31 663 IPR044681 GO:0005516
Vifa6g01150 665 Coils Coil 514 534 - -
Vifa6g01150 665 MobiDBLite consensus disorder prediction 405 445 - -
Vifa6g01150 665 Pfam Plant calmodulin-binding domain 581 663 IPR012417 GO:0005516
Vifa6g01150 665 SMART CaM_binding_2 550 663 IPR012417 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01150 Vifa-Chr6 372855577 372857669 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01150 564 661 Calmodulin-binding Proteins AT2G38800 53.061 2.19e-25 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01150 - - psat:127103464 1046.96