Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01127 ATGGCTTTTGCTTCCAATTTAGCCTTCACTTTCATACTTCTTTGCTTCATTGTTGTCACCTTTGCCTCAACCAATGTTCATATTGTGTATATGGGTGACAGAAGCCAAAACCAGAATGATTCACAACTACTTGAAGAGTCCCACCATGACATGCTATCATGTATTCTTGGAAGCAAAAGGGCTGCTATGAAGTCCATCCTGTATAGCTATAAGCATGGCTTTTCTGGTTTTGCTGCAGTTTTGACTCCGTCTCAAGCTAAGCTCATCGCAGATTTTCCGGGCGTTGTCCGCGTGATTCCTAATAAGATTCTTAGTCTTCACACAACAAGAAGCTGGGATTTCTTGCACGTAAAGCAGGATATCGTAACTGGTGTTCTTTCTAGAGCTCAATCTGGAAGAGGCACCATCATTGGTATCATAGACACTGGTATTTGGCCTGAGTCTCATAGCTTTAGAGATGATCATATGGATAATCCACCTCCTCGGTGGCGTGGAATATGTCAAGAAGGAGAAATCTTCGACCGCTCCAACTGTAATAGGAAAATTATCGGCGCGCGTTGGTATATTAAAGGATACGAAGCAGAATTCGGTAAGCTAAATACGAGTGAAGGGGTAGAGTACTTATCTCCGCGAGATGCATCAGGCCATGGAACTCACACATCATCGACTGCAGCCGGCATACTAGTAGAAAATGCAAACTTTAAAGGACTGGCTAAAGGATCAGCAAGAGGCGGGGCTCCATCAGCTTGGTTATCTATCTACAAAATTTGTTGGTCAACTGGAGGCTGCAGCTCTGCTGACCTTCTAGCAGCGTTTGATGATGCTATATTCGACAGAGTGGACATTATTTCAGCGTCTCTCGGCTCATATCCTCCACTTCCTACTTATGTTGAGGATGTGTTGGCCATTGGTTCCTTCCATGCTGTTGCTAAAGGGATTTCTGTTGTATGTTCTGGTGGTAACTCTGGACCATATGCTCAAACTGTCATCAATACTGCTCCTTGGGTTATTACCGTTGCTGCAAGTACCATCGATAGAGAATTTCCATCTACAATTAGCTTGGGAAATAATCAAACTATACAGGGTCAGAGTTTATATACAGGAAAAGAATTAAACAAGTTTTATCCTATAGTGTATGGAGAAGATATAGCAGCTTCAGATGCAGGTGAAGAAAGTGCAAGAAGCTGTGAATCAGGAAGTCTAAACTCCACCTTGGCCAAGGGAAAAGCAATTCTGTGTTTTCAGTCTCGGTCGCAGCGCTCGGCAACGACTGCTGTGAGAACTGTAATGGAAGCTGAGGCTGTTGGTCTCATATATGCTCAGTTTCCAACTAAAGATGTTGATATGTCTTGGGATATACCATCTGTCCAAGTTGATTTCATAGCAGGAACAAAAATTCTATCATACATGGAAGCTACTAGGAATCCTGTAATCAAGTTTAGCAAAACCAGAACCATTGTGGGGCAACAGATGTCTCCTGATGTCGCATTCTTCTCATCGCGTGGACCAAGTTCTCTTTCTCCTTCAGTTTTAAAGCCCGACATTGCTGCTCCCGGGGTTAATATTCTGGCTGCCTGGTCACCTGCTTCTTCTTCCAGCCTAGAATCTGATACAAGTCAAGATGAGTTATCATCTCTTAACTTCAAAATTGAATCAGGAACTTCAATGTCATGCCCCCACATATCCGGTATCGTCGCACTTGTAAAGACTATCCATCCAACTTGGAGCCCCGCCGCAATTAAATCCGCCCTTGTCACAACAGCTTCTCTAAAAAATGAGTATAGTCAATACATTGGAGCCGAGGGAGCACCGTACAAACAAGCCGATCCATTTGACTATGGTGGTGGACATGCTAACCCTAACAAACTCGCAGATCCTGGTCTCGTATACGACTTAGAAAAAACAGATTACATGAATTTCCTTTGTTCCATGGGCTACAATAACACTGCTATAACCTTATTAACAGATTCTCCTACCAAGTGCATTAAATCAAGAAAGTTCTTGTTGAATATGAACCTTCCTTCTATTACTATTCCTGAACTGAAGCAACCTTTGACAGTAACAAGAACCGTGACTAATGTTGGTCCTATTAAGTCTACCTACACTGTTCGTGTTGCGGCTCCAACTGGCATATCAGTGACAGTTGAGCCAACAGTGTTGAGATTTAACGAGAAAAGAAAGAAGATGAAATTCAAGAATCAAAGTTGGACTCCTACTGAACAACAGGGATCCAAATCCGTTCAAGAATGCTTAGCTTGCAAGTTATAG 2268 0.4272 MAFASNLAFTFILLCFIVVTFASTNVHIVYMGDRSQNQNDSQLLEESHHDMLSCILGSKRAAMKSILYSYKHGFSGFAAVLTPSQAKLIADFPGVVRVIPNKILSLHTTRSWDFLHVKQDIVTGVLSRAQSGRGTIIGIIDTGIWPESHSFRDDHMDNPPPRWRGICQEGEIFDRSNCNRKIIGARWYIKGYEAEFGKLNTSEGVEYLSPRDASGHGTHTSSTAAGILVENANFKGLAKGSARGGAPSAWLSIYKICWSTGGCSSADLLAAFDDAIFDRVDIISASLGSYPPLPTYVEDVLAIGSFHAVAKGISVVCSGGNSGPYAQTVINTAPWVITVAASTIDREFPSTISLGNNQTIQGQSLYTGKELNKFYPIVYGEDIAASDAGEESARSCESGSLNSTLAKGKAILCFQSRSQRSATTAVRTVMEAEAVGLIYAQFPTKDVDMSWDIPSVQVDFIAGTKILSYMEATRNPVIKFSKTRTIVGQQMSPDVAFFSSRGPSSLSPSVLKPDIAAPGVNILAAWSPASSSSLESDTSQDELSSLNFKIESGTSMSCPHISGIVALVKTIHPTWSPAAIKSALVTTASLKNEYSQYIGAEGAPYKQADPFDYGGGHANPNKLADPGLVYDLEKTDYMNFLCSMGYNNTAITLLTDSPTKCIKSRKFLLNMNLPSITIPELKQPLTVTRTVTNVGPIKSTYTVRVAAPTGISVTVEPTVLRFNEKRKKMKFKNQSWTPTEQQGSKSVQECLACKL 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01127 755 PRINTS Subtilisin serine protease family (S8) signature 552 568 IPR015500 -
Vifa6g01127 755 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Vifa6g01127 755 PRINTS Subtilisin serine protease family (S8) signature 212 225 IPR015500 -
Vifa6g01127 755 ProSitePatterns Serine proteases, subtilase family, serine active site. 553 563 IPR023828 -
Vifa6g01127 755 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 107 IPR037045 -
Vifa6g01127 755 FunFam Subtilisin-like protease SBT1.5 134 358 - -
Vifa6g01127 755 SUPERFAMILY Subtilisin-like 106 628 IPR036852 GO:0004252|GO:0006508
Vifa6g01127 755 Pfam Peptidase inhibitor I9 26 107 IPR010259 -
Vifa6g01127 755 Gene3D - 641 748 - -
Vifa6g01127 755 CDD Peptidases_S8_3 106 589 IPR034197 -
Vifa6g01127 755 Pfam Subtilase family 132 589 IPR000209 GO:0006508|GO:0008236
Vifa6g01127 755 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 733 IPR045051 -
Vifa6g01127 755 Gene3D Peptidase S8/S53 domain 134 637 IPR036852 GO:0004252|GO:0006508
Vifa6g01127 755 Pfam Fibronectin type-III domain 670 733 IPR041469 -
Vifa6g01127 755 ProSiteProfiles Serine proteases, subtilase domain profile. 111 624 - -
Vifa6g01127 755 CDD PA_subtilisin_like 351 479 - -
Vifa6g01127 755 Gene3D - 345 487 - -
Vifa6g01127 755 FunFam subtilisin-like protease SBT1.5 345 487 - -
Vifa6g01127 755 FunFam Subtilisin-like protease SBT5.3 17 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01127 Vifa-Chr6 365857935 365862006 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01127 1 732 Subtilisin-like Serine Gene Family AT4G10540 47.657 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01127 - - gmx:100775442 1167.14