Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01122 ATGGAGTTCTCTCTGCAATATGTTGAACCTTCCACTCTTATTTTTGTTCTCATCAGTCTCTCAACTTTTGTTATCATTTCACTTATTTTCCGTAAGAAAAAACTCCCATACCCACCAGGCCCAAAAGGCTTACCTATCATAGGGAACATGTTGATGATGGACCAACTAACCCATCATGGTATGGCCAAGCTTGCTGAAAAATACGGTGGATTTTGCCACCTGCAAATGGGTGTCATCCACATTGTCGCCGTTTCGACGCCTGAAATGGCCCGAGAAGTCCTTCAAGTCCAAGACGGTGTGTTCGCGAATCGGCCTGCCAATATTGCAATCACATACCTAACATATGACCAGGCCGACATGGCGTTCGCGAACTACGGTCCGTTTTGGAGACAAATGCGTAAGATTTGTGTCATGAAGCTCTTCAGCCGTAAACGGGCTGAATCATGGGCTTCCGTAAGAGAGGAAGTCGAGAAAACAGTTAAAACTGTTGCCTCGAAAATAGGTTCGCCTTTAAATTTAGGCGAACTTATCTTCTCTCTTACAAGAAGCATCACCTTTAAGGCTGCGTTCGGGTCCAATCTCAACAAAGGGCAAGATGAATTCATGGCAATTTTGCAAGAGTTTTCAAAGCTTTTCGGAGCTTTCGACATCTCGGAATTTCTTCCATGGTTAGCCTGGTTTAACGGACAGGATTTCCATAAAAGATTGGCTGGTGCAAGAAAAGCACTTGACGTGTTTATTGATGAGATTATTGACGATCATGTGACAAAGAGAAAGCATAGCATGCAGAATAAAGATAGTGAGAATGAAGTTGATGTAGATATGGTTGATGAATTAATGGCGTTTCTTGATGAGAGCGGTGTTAATGCTGCAGAAACTTCACAATCGACGCTTAAGCTTACTAGAGATAATATCAAAGCGCTTATCATGGACGTGATGTTTGGTGGAACTGAGACAGTAGCATCAGTGATAGAATGGACAATGGCAGAACTCATGAAAAGCCCAAAAGATCTTCAAAGGATTCAACAAGACTTAACCGATGTTATAGGATTGTATCGAAGATTCAACGAAACCGATTTAGAAAACTTACCTTTTCTCAAATGCATTATCAAAGAAACGCTTCGACTCCACCCTCCAATTCCCTTACTTCTCCATGAGACAGTTGAAGATACTATTGTCTCAGGTTATTTTATCCCGAAATCAACACGTGTGATGATAAATGCATGGGCGATTGGACGTGACAAAAACGCGTGGGATGAGCCGGAGAAGTTCAACCCATCACGATTTTTGAATGAGGGTATGCCTGATTTCAAAGGGAGTAACTTTGAGTTCATTCCTTTTGGGTCAGGAAGAAGGTCATGCCCAGGGATGCAACTTGGACTGTATGGAGTGGACATAGCCGTGGCTAATTTGCTTCATTGTTTCAATTGGGAGTTGCCTAATGGAATGAAACCAAGTGAGCTTGATATGAATGATGTGTTTGGTCTCACTGCTCCTAGAGCTGTTCAGCTTGTTGCTGTACCTAGTTATCGTCTCAATTGTCCTCTATGA 1551 0.4249 MEFSLQYVEPSTLIFVLISLSTFVIISLIFRKKKLPYPPGPKGLPIIGNMLMMDQLTHHGMAKLAEKYGGFCHLQMGVIHIVAVSTPEMAREVLQVQDGVFANRPANIAITYLTYDQADMAFANYGPFWRQMRKICVMKLFSRKRAESWASVREEVEKTVKTVASKIGSPLNLGELIFSLTRSITFKAAFGSNLNKGQDEFMAILQEFSKLFGAFDISEFLPWLAWFNGQDFHKRLAGARKALDVFIDEIIDDHVTKRKHSMQNKDSENEVDVDMVDELMAFLDESGVNAAETSQSTLKLTRDNIKALIMDVMFGGTETVASVIEWTMAELMKSPKDLQRIQQDLTDVIGLYRRFNETDLENLPFLKCIIKETLRLHPPIPLLLHETVEDTIVSGYFIPKSTRVMINAWAIGRDKNAWDEPEKFNPSRFLNEGMPDFKGSNFEFIPFGSGRRSCPGMQLGLYGVDIAVANLLHCFNWELPNGMKPSELDMNDVFGLTAPRAVQLVAVPSYRLNCPL 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01122 516 FunFam Cytochrome P450 84A1 30 510 - -
Vifa6g01122 516 Gene3D Cytochrome P450 29 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01122 516 PANTHER CYTOCHROME P450 84A1-RELATED 9 516 - -
Vifa6g01122 516 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01122 516 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01122 516 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01122 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Vifa6g01122 516 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01122 516 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01122 516 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01122 516 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01122 516 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01122 516 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01122 516 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01122 516 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01122 516 SUPERFAMILY Cytochrome P450 38 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01122 516 Pfam Cytochrome P450 38 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01122 516 CDD CYP71-like 67 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01122 Vifa-Chr6 364342371 364344710 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01122 9 516 Monolignol Biosynthesis Gene Families AT4G36220 65.882 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01122 K09755 - fve:101305825 737.258