Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01095 ATGGGTTTCCGTATAACAAGTATTATCAGAAGAGCATCATTTTCAAGAACCCAAGGATCTACCAAGGGATTTGAAGTCCCTAAAGGCTATCTTGCCGTCTATGTTGGAGATAACATGAGGCGTTTCGTGATTCCAATTTCATATTTGAACCAATCACTGTTTCAAGAATTATTAAACGAAGCTGAAGAAGAATTTGGATATGATCATCCCATGGGTGGTCTCACAATTCCATGCGGTGAAGATGAATTCCTAAGCCTCACTTCTCGCTTGAATTAA 276 0.3913 MGFRITSIIRRASFSRTQGSTKGFEVPKGYLAVYVGDNMRRFVIPISYLNQSLFQELLNEAEEEFGYDHPMGGLTIPCGEDEFLSLTSRLN 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01095 91 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 20 90 IPR003676 GO:0009733
Vifa6g01095 91 Pfam Auxin responsive protein 11 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01095 Vifa-Chr6 358863163 358863438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01095 25 83 Calmodulin-binding Proteins AT3G43120 61.017 8.72e-21 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01095 K14488 - gmx:100786095 152.525