Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01081 ATGGGTATTCGTCTACCATTTGTTGTTCTTCAAGCAAAACAGATATTCAAGTCCACCTCGACGCCACAGTTCCATAGCGGTTCGAAACACTCCAACAATGTTCCGAAGGGGCACATAGCAGTCTACGTCGGAGAGCTGCAAAAGAAACGGTTTGTGGTTCCGATATCATACTTGAACCATCCCACTTTTCTTGACTTGCTTAACAGAGTTGAAGAAGAGTTTGGATATAATCATCCAATGGGTGGTCTCACGATTCCTTGCAAAGAAGATGCTTTCATCAATATTACCTCACAACTACGTTCCTTGTGA 309 0.4304 MGIRLPFVVLQAKQIFKSTSTPQFHSGSKHSNNVPKGHIAVYVGELQKKRFVVPISYLNHPTFLDLLNRVEEEFGYNHPMGGLTIPCKEDAFINITSQLRSL 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01081 102 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 24 99 IPR003676 GO:0009733
Vifa6g01081 102 Pfam Auxin responsive protein 15 97 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01081 Vifa-Chr6 354727798 354728106 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01081 9 97 Calmodulin-binding Proteins AT4G34750 40.217 2.42e-15 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01081 K14488 - gmx:100803474 153.295