Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01074 ATGAAGGAAAATAGCAGCCTTGGGGTGATTCGGCTGAGTGTGCATACTACACCGGTGGAGTTGCGTGAGAAACTTGCTATACCAGAAACTTGCTACACCGGTGGATTAGTTTTGCAGCCAGCTACAAGTGCTCTGGATACCGTCAGTGAACGCTTGGTTCAAGATGCTCTCAACCATTTGATGAAGGGGAGGACAACATTAGTCATAGCTCACAGGTTAAGCACAGTTCAAAATGCTTATCAAATTGCACTCTGTTCAGGTGGGAGGGTTGCGGAACTAGGCACTCATTTTGAGCTGTTGGCTAAAAAGGGCCAGTATGCTTCACTGGTTGGCACTCAAAGGCTTGCATTTGAATAA 357 0.465 MKENSSLGVIRLSVHTTPVELREKLAIPETCYTGGLVLQPATSALDTVSERLVQDALNHLMKGRTTLVIAHRLSTVQNAYQIALCSGGRVAELGTHFELLAKKGQYASLVGTQRLAFE 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01074 118 Gene3D - 36 115 IPR027417 -
Vifa6g01074 118 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 36 117 IPR039421 -
Vifa6g01074 118 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 113 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01074 Vifa-Chr6 354113887 354114479 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01074 36 118 Calmodulin-binding Proteins AT2G36910 54.118 3.69e-21 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01074 K05657 - gmx:100791034 151.754