Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01045 ATGGGCGAAACTCTCACTTCCATTTCTCCCCCACTTGTTTTCTCCATCTTCTTCCTTTTCATCTTTTCACACGTTCTTTCCGCAGAAAATGAACTTCCCAAAACCTTCATCTTCCGCGTTAATTCTTACTCCAAACCCTCAATTTTCCCAACCCATTATCACTGGTACACCGCTGAATTCACTGAACAAACCCATATCCTTCATGTTTACGACACTGTTTTCCATGGTTTCTCTGCTGTGCTCACAAGACAGCAAGCTGCTTCCGTAGGGAACCACCCTTCGATCCTTGCGGTTTTTGAGGATCGTCGTAGACAGTTACATACAACTCGTTCACCCCAGTTTCTGGGTCTTCGTAACCAGCGAGGTTTATGGTCTGAATCTGATTATGGTTCTGATGTTATTGTTGGAGTCTTTGACACTGGCATTTGGCCTGAGAGACGGAGCTTCTCTGATGTGAACTTGAGTCCTATTCCACGGCGGTGGAAAGGGGTTTGTGAATCTGGTGAAAAATTCTCACCCAGAAACTGCAACAAAAAACTCATCGGTGCTAGATTCTTCTCCAAAGGTCATGAAGCAGGTTCTGGTTTTTCCGGTCCTTTGAACCCCATCAATGAAACCGTTGAGTTTCGATCCCCTCGTGACGCCGACGGTCATGGAACCCACACAGCCTCCACAGCCGCTGGTCGTTATGCTTTCCAAGCAAACATGTCCGGTTACGCTTCTGGAATCGCCAAAGGTGTTGCTCCGAAAGCAAGATTAGCGGTTTACAAAGTTTGCTGGAAGAATTCTGGTTGCTTTGATTCTGATATCCTCGCTGCCTTCGACGCAGCAGTAACTGACGGTGTTGATGTAATTTCCATATCAATCGGTGGCGGAGACGGTATAGCCTCACCTTACTATCTCGACCCAATAGCAATCGGATCTTACGGCGCCGTTTCCAGAGGCGTATTCGTTTCATCCTCCGCAGGAAACGATGGTCCAAGTGGAATGTCAGTAACCAACCTTGCACCATGGTTGACCACAGTGGGAGCAGGCACCATCGATCGTGATTTTCCAGCGCAGATTACCATGGGCGACGGGAGAAAATTCTCCGGTGTGTCACTATACTCCGGAGAAGCTTTGAACGGTAAAATGTATCAACTAGTTTACCCTGGAAAATCAGGGATTCTAGGTGATTCACTCTGCATGGAAAATTCACTGGATCCGAAACAAGTAACAGGGAAAATTGTAGTGTGTGATAGAGGGAGTAGCCCTAGAGTAGCAAAAGGGCTTGTTGTGAAGAAAGCCGGTGGCGTTGGAATGATCCTCGCAAACGGAATCTCAAACGGCGAAGGACTCGTTGGAGATGCTCATCTTCTTCCTGCTTGTGCTGTTGGTTCCAACGAAGGAGATATAATCAAAGCCTATATCACTTCATCGTCGAACCCAACTGCTACGATTGATTTCAAAGGGACTATCCTCGGAATCAAACCGGCTCCGGTTCTCGCTTCTTTCTCAGCAAGAGGACCCAACGGTTTGAACCCTCAGTTACTCAAACCGGATTTGATAGCTCCAGGAGTTAACATCCTTGCCGCTTGGTCTGACGCTGTGGGTCCAACTGGTCTTGATTCTGACACCCGTAGAACCGAGTTCAATATTCTGTCTGGAACATCAATGGCTGCACCTCATGTGAGTGGCGCTGCCGCGTTGCTGAAATCTGCTCATCCAGATTGGAGTCCCGCCGCCGTGAGATCCGCCATGATGACCACCGCTTCTGTTTTCGATAACCGGAACCTCCCTATGTTGGATGAGGCTACAGGGAATAATTCCACACCTTATGATTTCGGCTCGGGTCATCTCAATTTGGGTAATGCTATGGATCCTGGATTGATCTACGATATTACAAACACCGATTACGTTAACTTCCTCTGCGCTATTGGTTACGAACCAAAGGTTATTCAGGTAATTACTCGCGTGCCGGAGAATTGTCCCGCGAAGAAGCCTTTGCCGGAGAATCTGAATTACCCGTCGTTCGTGGCTATGTTTCCGGTGGCTTCAAAAAAATTAGCTTCCAAGATGTTTATAAGGACTGTTACTAATGTGGGAGCGGTGAACTCAGTTTACCACGTGAGTGTGGAGTCACAGATTAAGGGGGTTACGGTGACGGTGAAGCCGTCACGGCTCGTGTTTTCAGAGGCTGTGAAGAAGAGGAGTTATGTGGTGACGGTAACGGCGGATACACGAAATCTGAAACTGGATCCTTCTGGAGCGGTTTTCGGGTCGCTTACGTGGACGGATGGTAAACACGTTGTTCGGAGCCCCATTGTTGTGACTCAAATAGAACCGTTATAG 2331 0.4792 MGETLTSISPPLVFSIFFLFIFSHVLSAENELPKTFIFRVNSYSKPSIFPTHYHWYTAEFTEQTHILHVYDTVFHGFSAVLTRQQAASVGNHPSILAVFEDRRRQLHTTRSPQFLGLRNQRGLWSESDYGSDVIVGVFDTGIWPERRSFSDVNLSPIPRRWKGVCESGEKFSPRNCNKKLIGARFFSKGHEAGSGFSGPLNPINETVEFRSPRDADGHGTHTASTAAGRYAFQANMSGYASGIAKGVAPKARLAVYKVCWKNSGCFDSDILAAFDAAVTDGVDVISISIGGGDGIASPYYLDPIAIGSYGAVSRGVFVSSSAGNDGPSGMSVTNLAPWLTTVGAGTIDRDFPAQITMGDGRKFSGVSLYSGEALNGKMYQLVYPGKSGILGDSLCMENSLDPKQVTGKIVVCDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACAVGSNEGDIIKAYITSSSNPTATIDFKGTILGIKPAPVLASFSARGPNGLNPQLLKPDLIAPGVNILAAWSDAVGPTGLDSDTRRTEFNILSGTSMAAPHVSGAAALLKSAHPDWSPAAVRSAMMTTASVFDNRNLPMLDEATGNNSTPYDFGSGHLNLGNAMDPGLIYDITNTDYVNFLCAIGYEPKVIQVITRVPENCPAKKPLPENLNYPSFVAMFPVASKKLASKMFIRTVTNVGAVNSVYHVSVESQIKGVTVTVKPSRLVFSEAVKKRSYVVTVTADTRNLKLDPSGAVFGSLTWTDGKHVVRSPIVVTQIEPL 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01045 776 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Vifa6g01045 776 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
Vifa6g01045 776 PRINTS Subtilisin serine protease family (S8) signature 548 564 IPR015500 -
Vifa6g01045 776 Pfam Fibronectin type-III domain 665 770 IPR041469 -
Vifa6g01045 776 Gene3D - 636 773 - -
Vifa6g01045 776 FunFam Subtilisin-like protease SBT1.5 132 363 - -
Vifa6g01045 776 CDD PA_subtilisin_like 355 480 - -
Vifa6g01045 776 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 107 IPR037045 -
Vifa6g01045 776 Gene3D - 348 487 - -
Vifa6g01045 776 CDD Peptidases_S8_3 105 585 IPR034197 -
Vifa6g01045 776 SUPERFAMILY Subtilisin-like 106 623 IPR036852 GO:0004252|GO:0006508
Vifa6g01045 776 Gene3D Peptidase S8/S53 domain 132 632 IPR036852 GO:0004252|GO:0006508
Vifa6g01045 776 ProSiteProfiles Serine proteases, subtilase domain profile. 105 619 - -
Vifa6g01045 776 SUPERFAMILY PA domain 379 473 IPR046450 -
Vifa6g01045 776 ProSitePatterns Serine proteases, subtilase family, serine active site. 549 559 IPR023828 -
Vifa6g01045 776 Pfam Peptidase inhibitor I9 61 107 IPR010259 -
Vifa6g01045 776 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 63 770 IPR045051 -
Vifa6g01045 776 FunFam subtilisin-like protease SBT1.5 348 487 - -
Vifa6g01045 776 Pfam Subtilase family 130 599 IPR000209 GO:0006508|GO:0008236
Vifa6g01045 776 FunFam Subtilisin-like protease SBT1.5 636 773 - -
Vifa6g01045 776 Pfam PA domain 380 465 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01045 Vifa-Chr6 344555068 344557398 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01045 16 776 Subtilisin-like Serine Gene Family AT4G34980 73.691 0.0 1176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01045 - - gmx:100817537 1315.83