Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00931 ATGGATTCTAATACCTTACATTCTTCACAATCACATTGTGTACAATTGGAAATTCACCAAGTTGTTCCACCACCTCACAAAACAACTTTACACAAACTCAAACTTAGACTCAAAGAAACTTTTTTCCCTGATGATCCTATGCGCCAATTCAAAGGAAAATCTCCTAAGATAAAACTTATCTTAGGAGCGAAATACATGTTCCCTATTCTTCAATGGGGTTCGAATTATAACGTGAAACTCTTCAAATCCGATCTTGTTTCCGGCCTCACTATTGCTAGTTTGGCCATACCTCAGGGAATTAGTTATGCTAAGCTTGCCAATCTTCCTCCAATTGTAGGACTATATTCTAGTTTTGTTCCTCCACTTATTTATGCTGTTCTTGGAAGTTCAAGGGATCTAGCAGTAGGACCTGTTTCAATTGCGTCGCTTGTTTTAGGATCTATGCTTAGACAAGAAGTGTCACCTTCTGCTGAACCTCTTCTGTTTCTTCAACTTGCTCTTACTTCAACTTTTTTTGCTGGTCTATTTCAAGCTTCACTAGGAATTCTAAGGTTAGGATTTATCATAGATTTTTTATCTAAAGCAATCCTAATTGGATTCATGGCTGGAGCTGCTATAATTGTGTCTTTGCAACAACTTAAGAGCTTACTTGGAATCACACACTTTACTAAAGAGATGGGTCTTGTTCCTGTTATGACTTCTGTTTTTCAAAATATACATGAGTGGTCATGGCAAACAATAGTGATGGGAATTTGCTTCTTGGTGATACTACTCATAGCAAGACACGTTAGCATAAGGAAACCAAAGCTATTCTGGGTCTCTGCTGGGGCTCCTCTTATGTGTGTCATCATCTCTACTCTTCTGGCTTTTGCAATCAAGGCTCAAAATCATGGCATCAGTGTAATTGGAAAATTACAAGCAGGAATAAATCCTTCTTCATGGAATATGTTGAAATTTCATGGAAGCCACCTTGGTCTAGTTATGAAAACAGGCCTTATCACTGGCATTTTGTCACTAACTGAAGGTATTGCAGTAGGAAGAACATTTGCAGCTCTGGGAAACTACAAAGTAGATGGAAATAAGGAAATGATGGCAATCGGGTTTATGAATGTGGTTGGCTCTTTCACTTCCTGCTATGTCACAACAGGTGCTTTCTCTCGCTCAGCTGTTAATAACAATGCTGGAGCAAAAACAGCAGCTTCAAACATAGTAATGTCTGTGACAGTGATGGTGACACTCCTTTTGCTTATGCCATTGTTCCAGTACACACCTAATGTTGTATTGGGTGCAATCATAGTCACTGCGGTGATTGGCCTTGTTGATATCCCTGCTGCTTGTCACATTTGGAAGATGGACAAATTTGACTTCCTTGTGATGTTAACCGCTTTTTTGGGTGTCGTTTTTATTTCAGTCCAGGAAGGCCTTGCTGTTGCAGTTGCATTATCGACGTTTAGGTTACTCCTGCAAATTACGAGGCCTAAAACAGTAATGATGGGGAATATAGCAGGGACAGACATATATAGAAATCTTCACCAATACATGGAAGCTAAAAGAATACCAGGCTTTCTTATTTTAAGCATCGAGGCTCCCATCAATTTCGCAAACATCACATATCTCAATGACAGGACAATGCGATGGATTGAAGAGGAAGAGGAAGATAACGAAAAGGAACACTCGAGCCTTCGATTTCTAATCCTAGATATGTCAGCTGTGAGCGCCATTGACACAAGCGGAATCTCGCTTTTCAAGGAATTAAAGGCAACAATGGAAAAGAAAGGCATTGAGCTTGTGTTGGTGAATCCTCTGGCTGAGGTCATAGAAAAGTTGAAAAAAGCAGACCACGCTAATAACTTCATTCGAGCAGACAGCCTTTTCTTGACAGTTGGAGAGGCTGTGGCTTCACTTTCATCAACAATGAAGAGTCAAACAACCATGACAGAAGAAACACAAAACAGTGCCACGTAA 1965 0.3995 MDSNTLHSSQSHCVQLEIHQVVPPPHKTTLHKLKLRLKETFFPDDPMRQFKGKSPKIKLILGAKYMFPILQWGSNYNVKLFKSDLVSGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLIYAVLGSSRDLAVGPVSIASLVLGSMLRQEVSPSAEPLLFLQLALTSTFFAGLFQASLGILRLGFIIDFLSKAILIGFMAGAAIIVSLQQLKSLLGITHFTKEMGLVPVMTSVFQNIHEWSWQTIVMGICFLVILLIARHVSIRKPKLFWVSAGAPLMCVIISTLLAFAIKAQNHGISVIGKLQAGINPSSWNMLKFHGSHLGLVMKTGLITGILSLTEGIAVGRTFAALGNYKVDGNKEMMAIGFMNVVGSFTSCYVTTGAFSRSAVNNNAGAKTAASNIVMSVTVMVTLLLLMPLFQYTPNVVLGAIIVTAVIGLVDIPAACHIWKMDKFDFLVMLTAFLGVVFISVQEGLAVAVALSTFRLLLQITRPKTVMMGNIAGTDIYRNLHQYMEAKRIPGFLILSIEAPINFANITYLNDRTMRWIEEEEEDNEKEHSSLRFLILDMSAVSAIDTSGISLFKELKATMEKKGIELVLVNPLAEVIEKLKKADHANNFIRADSLFLTVGEAVASLSSTMKSQTTMTEETQNSAT 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00931 654 Gene3D STAS domain 492 638 IPR036513 -
Vifa6g00931 654 Pfam Sulfate permease family 81 461 IPR011547 GO:0016020
Vifa6g00931 654 ProSitePatterns SLC26A transporters signature. 110 131 IPR018045 GO:0008271|GO:0008272
Vifa6g00931 654 CDD STAS_SulP_like_sulfate_transporter 513 613 - -
Vifa6g00931 654 Pfam STAS domain 513 631 IPR002645 -
Vifa6g00931 654 NCBIfam sulfate permease 68 631 IPR001902 GO:0016020|GO:0055085
Vifa6g00931 654 ProSiteProfiles STAS domain profile. 512 635 IPR002645 -
Vifa6g00931 654 FunFam Sulfate transporter 31 492 638 - -
Vifa6g00931 654 PANTHER SULFATE TRANSPORTER 31 640 IPR001902 GO:0016020|GO:0055085
Vifa6g00931 654 SUPERFAMILY SpoIIaa-like 515 635 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00931 Vifa-Chr6 318669620 318673396 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00931 16 642 Inorganic Solute Cotransporters AT3G15990 65.769 0.0 836
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00931 K17471 - gmx:100787284 1064.29