Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00922 ATGGAATGCGAGTACATGAAGAGGTGGTTTGGATCTCTGACGGAGCAGAACCGTAGGCTTCAACGAGAAGTTGAGGAACTTAGGGCTATGAAAGTGGGCCCACTCACTGTATTATCCCCTCACAGTTCCGAACCACTTCCAGCTTCAACGTTATCCATGTGTCCCCGATGTGAACGTGTTACCACCAACGTCGCCGCCGCCGCTGTCACCGTCGACAAAAATGTTGCCGCTGCCGTCACTTTGTCTCCTAAAGTGTCAACACTTTCTACCCAATCGCGTCAAAAATGA 288 0.5069 MECEYMKRWFGSLTEQNRRLQREVEELRAMKVGPLTVLSPHSSEPLPASTLSMCPRCERVTTNVAAAAVTVDKNVAAAVTLSPKVSTLSTQSRQK 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00922 95 Coils Coil 10 30 - -
Vifa6g00922 95 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 1 70 - -
Vifa6g00922 95 SMART halz 1 40 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00922 Vifa-Chr6 316381429 316381716 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00922 1 71 Homeobox Transcription Factor Family AT1G70920 57.746 6.45e-21 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00922 K09338 - pvy:116127405 136.732