Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00906 ATGTTGACTTTTTCATTGACAAGAACCGATAGGATTTTGACACCTTCCGATTTCACGATCATCGATTTTCTGATGGAGTTAGGGATTGATGATTCTGTTACTGACGATACATTAAGAGAAGCTGCCATGGTTGAAGTGGATAGCATACCTGATGAAAACAGAGAAGAAGAAAGTTCGGCCGAACCAACTTACAAACAAGACCAAGACGGTCAGGAGTTTGAGTCGGAAGCAGCTGCACATGCATTTTATAATGCATACGCAGCCGAGGTTGGATTCATCATTCGTGTAAGCAAACTTTCACGGTCAAGGCGTGACGGAACTGCTATTGGACGCGCTCTTGTTTGCAACAAAGAGGGTTACAGAATGCCGGACAAACGCGAAAAGATCGTTAGGCAAAGGGCAGAGACAAGGGTTGGTTGCAGGGCAATGATTATGGTGAGGAAAGTTGGTTCTGGTAAATGGGTTGTTACGAAATTTGTTAAGGAGCACACTCATCCATTGAATCCTGGAAGTGGTAGAAGGGATTGCATGTTTGAACAATATCCGTCTCAGAACGAACACGATAAAATCCGCGAACTATCTCAACAATTGGCAATCGAGAAAAAGCGATCGGTGACTTATAAAAGACAACTTGAAGTGATATTTGATTATATCGAGGAGCACAATGTGAGCCTTTCAAAGAAAATACAGCACATAGTAGACAGTGTGAAGCAGATGGAACCTAAAGAAGAAGAACACAATCATTCATAG 750 0.4227 MLTFSLTRTDRILTPSDFTIIDFLMELGIDDSVTDDTLREAAMVEVDSIPDENREEESSAEPTYKQDQDGQEFESEAAAHAFYNAYAAEVGFIIRVSKLSRSRRDGTAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMIMVRKVGSGKWVVTKFVKEHTHPLNPGSGRRDCMFEQYPSQNEHDKIRELSQQLAIEKKRSVTYKRQLEVIFDYIEEHNVSLSKKIQHIVDSVKQMEPKEEEHNHS 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00906 249 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 42 239 - -
Vifa6g00906 249 Pfam FAR1 DNA-binding domain 82 169 IPR004330 -
Vifa6g00906 249 MobiDBLite consensus disorder prediction 46 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00906 Vifa-Chr6 307127154 307129734 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vifa6g00906 FAR1 8.2e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00906 - - mnt:21407482 319.316