Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00894 ATGGAAACGGAAGTTGACCAGAGAGAGGTCGAAGACGGTGTAGATTTTTCTGGGAAAAATCCATGCTTTGCTTACAAGCTTGATGTCTTTGATACCGACCCCGGTGATCACAAGGTTAGAGTCTGCAGAGAGAAGACTAATGATCATGTATTCACAATGAAAAAGCTAAAGAAATTAGAGATGCTTCGAAGAGGCCAAGTCGAACATGTCAAAGCGGAAAGGAATGTACTCGCTGAGGTTGACAGTAATTGCATAGTCAAACTTTATTGTTCTTTCCAAGATGATGAGTATCTTTATCTTATTATGGAGTATCTACTGGGTGGAGACATGATGACTCTACTTATGAGAAAGGATACCTTGACTAAAGATGAAGCCAGGTTTATAAAGAGGATTAATGGTCATTTGGTTACTGTGAGCAATGAAGTTGTCCATGGAGAAGTGAACAATTTTGATCGTTCTTTTCTTGATAAAACCGCGGAAGAACGTCATAGTTGA 495 0.3939 METEVDQREVEDGVDFSGKNPCFAYKLDVFDTDPGDHKVRVCREKTNDHVFTMKKLKKLEMLRRGQVEHVKAERNVLAEVDSNCIVKLYCSFQDDEYLYLIMEYLLGGDMMTLLMRKDTLTKDEARFIKRINGHLVTVSNEVVHGEVNNFDRSFLDKTAEERHS 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00894 164 Pfam Protein kinase domain 38 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifa6g00894 164 PANTHER SERINE/THREONINE-PROTEIN KINASE 38 128 - -
Vifa6g00894 164 SUPERFAMILY Protein kinase-like (PK-like) 38 128 IPR011009 -
Vifa6g00894 164 Gene3D Phosphorylase Kinase; domain 1 37 147 - -
Vifa6g00894 164 ProSiteProfiles Protein kinase domain profile. 25 164 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00894 Vifa-Chr6 305762976 305764653 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00894 39 127 AGC Kinase Gene Family AT3G23310 87.640 6.27e-50 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Vifa6g00894 Pkinase 1.7e-13 CL0016