Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00859 ATGGGTTTTTTGTTGAAAGAAGTTTTGAAGACTTTGTGTGGTAGGAATCAGTGGTCTTATGCTGTGTTCTGGAAGATTGGTTGCAACAATTCTAAGCTATTGATTTGGGAAGAATGTTATTATGAACCATTTTCACATCCTTCCGCTCATGGTATTGTTGGGATGTCAAATGTGCGTAATCCGAACGAGGAAGGATGTTGGTTTTCTTCTGAGTTTAAATCGTCTCATCTAGGAATTCAAGAGGAGGATAGAGTCTCTTCTTTGATTAACAAATTGAGCGTAAATAATTTAGTCGTTGTTGCAGGTGAAGGTATAATTGGACGCACTGTGTTTACCAATAGTCATCAGTGGATTCTCTTGAATAGTTTTGCTAAAGATGCATATCCACTTGAGGTATATGCTGAAATGCATCTCCAATTTTCAGCTGGAATGCAGACAGTAGCAGTTATTCCAGTGCTTCCTCATGGGATTGTTCAACTTGCTTTAGCTTATGCGTTAAGAATCAGAGAAGGTGCTTCAGAAGACGATATCAAGTCACTTCCTATGTATAGGCTTATGGTTGATGACAACAACAACAACTCCATTTCCAATTCCATTTTGGTGAATTGGTAA 612 0.3824 MGFLLKEVLKTLCGRNQWSYAVFWKIGCNNSKLLIWEECYYEPFSHPSAHGIVGMSNVRNPNEEGCWFSSEFKSSHLGIQEEDRVSSLINKLSVNNLVVVAGEGIIGRTVFTNSHQWILLNSFAKDAYPLEVYAEMHLQFSAGMQTVAVIPVLPHGIVQLALAYALRIREGASEDDIKSLPMYRLMVDDNNNNSISNSILVNW 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00859 203 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 160 IPR043561 GO:0003700|GO:0006355
Vifa6g00859 203 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 161 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00859 Vifa-Chr6 298281188 298281893 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00859 1 161 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 49.068 1.94e-48 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00859 - - cam:101492357 281.952