Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00804 ATGGATGGTGGAAACATGCACGGCGGCATGGATGGTATGACACACAACTCATCATCATCATCATCAAATGGAACCATGAAGATACACGACATGATGCACATGACATTCTACTGGGGAAAAGACGCGTTGATTCTCTTCAACGATTGGCCTGCTGGTGACACCGGTATGTATGTATTGGCCTTGATCATTGTTTTCATCATGTCGGTTCTCATTGAGTTACTCTCCCGAACCCGGTTTGTTAAACCCGGTTCGAACCCTGTAAGTGCCGGTCTGGTTCAGACGCTGTTGCATGTACTGAGAGTTGGTCTAGCTTATTTGGTTATGTTGGCTCTTATGTCTTTCAATGGAGGCGTGTTCTTGGTTGCTGTGCTTGGTCATGCTCTTGGATTTCTCTTGTCTAGCAGTGCTTTCAGAAAACAACAAAACCATGACGAGCCTTATGATCTTCCTCCTATATCTTGTTAA 465 0.4495 MDGGNMHGGMDGMTHNSSSSSSNGTMKIHDMMHMTFYWGKDALILFNDWPAGDTGMYVLALIIVFIMSVLIELLSRTRFVKPGSNPVSAGLVQTLLHVLRVGLAYLVMLALMSFNGGVFLVAVLGHALGFLLSSSAFRKQQNHDEPYDLPPISC 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00804 154 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 25 144 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vifa6g00804 154 MobiDBLite consensus disorder prediction 1 23 - -
Vifa6g00804 154 Pfam Ctr copper transporter family 34 77 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vifa6g00804 154 Pfam Ctr copper transporter family 87 132 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00804 Vifa-Chr6 280693353 280693817 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00804 35 154 Inorganic Solute Cotransporters AT5G59030 48.387 7.46e-36 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00804 K14686 - gmx:100306175 202.986