Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00800 ATGTCCGGATGTCAAGTTCCACCAGTTTCTACTCAAGTTGGTACTGAAAAAGAAGAAAGGGTTGTCGTTAAAAAAAAATCTCGAGAGCAATTTACAAGGGATGAAGATATACTGCTTATCCAATCATGGCTCGATGTTTCAAATGATCCAATTGTGGGAGTTGATCAAAAAGCTGAGAGTTTTTGGTTAAGAATCGCTGCCAATTATAACCAGTATTGTGCGCAATCGCGGGAAAAGTTAGGCGGGCAATTAAAATGTCGATGGCATCGAATAAATGGCTTGGTTCAAAAATTTGTTGAGTGTTACAAACAAGCTGTTAATGGAAAAAAAAAGTGGGACATCGGAGAACGATATCATGGTTGCCGCACATGCTTTTTTTCTCAGGATGAAGATACAACATTCAATCTTGAGTATGTATGGCGATTGTTAAAAGATGAACCTAAATGGATGGGAGAATCGATTGGAAATTCTTCAAAAATTACAAAGAGCTCTGCTAGTGGGGCATCATCGGATAACCCAAATACACCTTCAAGTTATGAGTTTAACTCATCATCACCAATGGAGCGTCCAATGGGACAAAAAGCAGCAAAAAGGAAGGGTAAGGCAAAGGAAATTCCAAATGCAATGCAAGATGCAAGGATTAAAAGAGCAGCAGCAATGGAAAGACTAGCTCAATGTAAGGAGGACGAGCTAGAACTAAAGGCAATGAATATCATCATGAAAGACACTTCTACTATGAATGATAATCAACGAGATATTCATGAAAAATATTGTAATAAGATGAAAAAAAAAAATGGAATGTAG 804 0.3756 MSGCQVPPVSTQVGTEKEERVVVKKKSREQFTRDEDILLIQSWLDVSNDPIVGVDQKAESFWLRIAANYNQYCAQSREKLGGQLKCRWHRINGLVQKFVECYKQAVNGKKKWDIGERYHGCRTCFFSQDEDTTFNLEYVWRLLKDEPKWMGESIGNSSKITKSSASGASSDNPNTPSSYEFNSSSPMERPMGQKAAKRKGKAKEIPNAMQDARIKRAAAMERLAQCKEDELELKAMNIIMKDTSTMNDNQRDIHEKYCNKMKKKNGM 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00800 267 MobiDBLite consensus disorder prediction 154 189 - -
Vifa6g00800 267 PANTHER - 14 264 - -
Vifa6g00800 267 Coils Coil 209 229 - -
Vifa6g00800 267 Pfam No apical meristem-associated C-terminal domain 133 252 IPR029466 -
Vifa6g00800 267 MobiDBLite consensus disorder prediction 192 207 - -
Vifa6g00800 267 MobiDBLite consensus disorder prediction 154 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00800 Vifa-Chr6 279586598 279587401 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00800 24 230 Glutathione S-transferase Gene Family AT5G41240 28.767 3.51e-18 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00800 - K19269 psat:127115199 371.703