Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00790 ATGGGAAGCGTAGAAAGAGAGATGAAAAATATGAGAGAATATTTTAGGAGTGGAGTAACAAAGGAAGCATCTTGGAGAGAATCACAACTAAAAGGGTTGCGTCGTTTTCTTATGGAAAAAGAGAGTGATATCTTCAAAGCTCTCATGCAAGATTTAGGGAAACATGGAGTTGAAGCTTTTAGAGATGAGATAGGAACGTTGGTGAAGACTTTAAATCTAGCAATAAAGTGTCTCAAAGATTGGATGTCAAGCAAGAATGCTAATCTACCAGCATTAGCATTGCTATCAAGTGCAGAAATTGTTCATGAGCCTCTTGGTCTTGTTCTCATTATTTCTTCTTGGAATTTCCCCTTTGCACTGTCTTTGGAGCCATTGATAGGAGCTATAGCTGCTGGAAACACAGCAGTGTTGAAACCTTCAGAGTTGTCTGCTTCATGTTCCTCTTTACTTGCTTCTGGCATTGCTACTTATTTAGATGATAAAGCCATTAGAGTTATTGAAGGAGGACCAGAGGAATCCGAGCAGTTATTAAACCAAAAATGGGACAAAATCTTCTTTACAGGTAGTGCACGCGTGGGGCGCATTGTGATGTCTGCTGCTGCAACGCACCTGACCCCTGTAGTGCTCGAGTTGGGTGGAAAATGTCCTGCAGTTGTGGACTCACTTTCATCTTCTTGGGATTTAGAGGTTATTGTGAAGAGGATTATTGTTGGAAAGTATGGGACTTGTGCTGGTCAAGCATGCATAGCAATTGATTATGTCATTGTGGAAAAGAGTTACTGTTCAAAACTGGTGGAATTAATGAAGGTGTGGATCAAGAAAATGTTTGGAGACTACCCAAAACGTTCGAATACTATAGCAAGGATAGTTAATAAACAACAGTTAGTTAGATTGAAGAAACTTCTAACTGGTCCAAAAGTTAAAGAATCTGTGGTTTATGGTGGCTCAGTGGATGAAGAAAACTTATTTATTGAGCCAACAATCTTGGTGGATCCACCACTTGATGCAGCCATAATGGTAGATGAAGTTTTTGGCCCAATACTTCCAATTATCACTGTGGACAAGATTGAGGACAGCATTGAATTCATAAGCTCTAGGCCTAAACCTCTTGCCCTTTATGTTTTCACCAAAAACCAAACACTACAGAAAAGAATGATATCTGAAACATCATCTGGCAGTGTTACTTTCAACGATGCAATTCTACAATACGCGGCAGATAGTTTACCATTTGGAGGAGTAGGTGCGAGTGGATTTGGCATGTACCATGGAAAATTCTCGTTTGACACATTCAGTCACCAGAAAGCTATTGTTAGAAGAAGTTTCTTAACTGATTTTTGGTATAGGTATCCACCATGGACACCAAACAAGTTTCAACTACTTGAAGTCTCTTACAATTATGATTATATTGGATTGATCCTTGTTATTCTCGGATTAAAGAGACCATCGAAACGACAAATCGTGCCTTGTTAA 1470 0.3932 MGSVEREMKNMREYFRSGVTKEASWRESQLKGLRRFLMEKESDIFKALMQDLGKHGVEAFRDEIGTLVKTLNLAIKCLKDWMSSKNANLPALALLSSAEIVHEPLGLVLIISSWNFPFALSLEPLIGAIAAGNTAVLKPSELSASCSSLLASGIATYLDDKAIRVIEGGPEESEQLLNQKWDKIFFTGSARVGRIVMSAAATHLTPVVLELGGKCPAVVDSLSSSWDLEVIVKRIIVGKYGTCAGQACIAIDYVIVEKSYCSKLVELMKVWIKKMFGDYPKRSNTIARIVNKQQLVRLKKLLTGPKVKESVVYGGSVDEENLFIEPTILVDPPLDAAIMVDEVFGPILPIITVDKIEDSIEFISSRPKPLALYVFTKNQTLQKRMISETSSGSVTFNDAILQYAADSLPFGGVGASGFGMYHGKFSFDTFSHQKAIVRRSFLTDFWYRYPPWTPNKFQLLEVSYNYDYIGLILVILGLKRPSKRQIVPC 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00790 489 PANTHER ALDEHYDE DEHYDROGENASE 3 471 IPR012394 GO:0006081
Vifa6g00790 489 FunFam Aldehyde dehydrogenase 213 416 - -
Vifa6g00790 489 Pfam Aldehyde dehydrogenase family 4 436 IPR015590 GO:0016491
Vifa6g00790 489 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 12 434 IPR016162 GO:0016491
Vifa6g00790 489 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 213 416 IPR016163 GO:0016620
Vifa6g00790 489 PIRSF ALDH 2 472 IPR012394 GO:0006081
Vifa6g00790 489 FunFam Aldehyde dehydrogenase 12 216 - -
Vifa6g00790 489 SUPERFAMILY ALDH-like 4 453 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00790 Vifa-Chr6 276269917 276273825 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00790 3 480 Aldehyde Dehydrogenase Gene Family AT4G36250 54.184 0.0 564