Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00772 ATGGATATGCACGGCGGCCATGATGGAATGGCAATGACACCAAACTCATCCTCATCATCTACCAATGGCACCATGATGAGGGGCCATAAGATGCACGGCATGATGATGCACATGACATTCTTCTGGGGGAAAGACGCTTTGATTCTCTTCGATGGTTGGCCTGGTGGAAATTCTGGTATGTACGTATTGGCCTTGATCATTGTTTTCTTCATGTCCGTATTCATCGAGTTACTCTCCGACACACGGATCGTCAAACCCGGTTCAAACCCTGTTGTTGCCGGTCTGGTTCAGACCCTTTTGCATGTTCTTAGGGTTGGCCTGGCTTATTTGGTTATGTTGGCTCTGATGTCTTTCAATGGAGGTGTGTTCTTGGTTGCGTTGCTTGGTCATGCTATTGGTTTCTTCTTCTTTGGCAGTGCTTTCAGAAAACAACACCATGATGAACCTTATGATCTTCCTCCAATGTCTTGTTAA 474 0.4599 MDMHGGHDGMAMTPNSSSSSTNGTMMRGHKMHGMMMHMTFFWGKDALILFDGWPGGNSGMYVLALIIVFFMSVFIELLSDTRIVKPGSNPVVAGLVQTLLHVLRVGLAYLVMLALMSFNGGVFLVALLGHAIGFFFFGSAFRKQHHDEPYDLPPMSC 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00772 157 MobiDBLite consensus disorder prediction 1 22 - -
Vifa6g00772 157 Pfam Ctr copper transporter family 90 137 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vifa6g00772 157 Pfam Ctr copper transporter family 38 79 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vifa6g00772 157 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 29 145 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00772 Vifa-Chr6 272107605 272108078 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00772 39 157 Inorganic Solute Cotransporters AT5G59030 54.032 7.18e-40 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00772 K14686 - gmx:100306175 201.06