Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00765 ATGATTTATTTTGATTTAGGTGGCATCGGGAGCAGCTCTATGGTTCGAAAACTTGAAACAGATGAAATTGATGCTGAAATGTATATTCAGCCTGGAAATCCCTATTTTTTTGCGAAATACTATCATTACAGACCCAATGAATTGCATATACCAAAAAAAGTTATTAAGGATTTCTGCCTCTGCTTCACAAAACATGTCAACCTTATATGTTGCAACTGCAAGGATATAGAGAGCAATGAAATAGCATCTTATCATGAGAAGTTGCCCGAAATGACCACAAAACATAGCAAAAAGAGAGGAGAAATACGTACATGGAAAAATGGCCGAGTGTTTGTGCTGGGGTGGGAAAATTTTTGGGCCAAGTACAAGATTAAAGAAAGTGATAGCTGCTTGTGTGAAATTGTGTTGCATCAAGAGAAAGCAATAGAAATGATAAGGGTGCACCTTGTTAGGAAGGTTAGGAATGAATGA 471 0.3715 MIYFDLGGIGSSSMVRKLETDEIDAEMYIQPGNPYFFAKYYHYRPNELHIPKKVIKDFCLCFTKHVNLICCNCKDIESNEIASYHEKLPEMTTKHSKKRGEIRTWKNGRVFVLGWENFWAKYKIKESDSCLCEIVLHQEKAIEMIRVHLVRKVRNE 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00765 156 Gene3D - 16 154 IPR015300 -
Vifa6g00765 156 SUPERFAMILY DNA-binding pseudobarrel domain 29 135 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00765 Vifa-Chr6 270293048 270293683 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00765 30 151 B3 DNA Binding Superfamily AT5G57720 30.328 1.40e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00765 - - mtr:120578114 225.328