Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00762 ATGTTTTCTGCTGATACCCTTGTTGAGAATTTTCCTGGTTCTGTTAATCGATGTATGTTCGGAAACATTCCCGTGTCTGTTTTTTCAAACCAGAATCCTGAAAATGGTTTCGACTTTGAAGATTCTGTTTCAGTTTCTATATCTCCTTCAACTCATTCAGAATCTGTTACTGATTCTGTTCCATCTTCTGGTATAAGTTCAAATGGTAATGATTTGGGTGCAGGAACTGGAAATGGAACTAGTACTAGTTCTGAGAGCTATAGTAATTGCAGTTACACCACTGATAATTCTATAGTTGATTGTGATTCACCGGAAAATAATGCGTGTGAGGTGTTTGATAGAATACCTCATGATCCGTTTAGAGAGGTAGAAGCTGTTTTCAGTTTTCCAAATGGGGCTTGGAAGATGAATGAAGAGAGTAATAATAATAATATGGTTTTGGGTCCTAGAGGGTCAAGGGAAAAGAGAGGACATTTGATGAATGATATTGGTATAGATGAGAGAAGTTACAAGGTTTCAGCTGTTTATTCTGATGATTCAGATCTATCAGAGATGTTTGATGAGGTACTTCTTTGTAATGATGGTAAAAGTCCATCCATTTTTTGTTCTAATCCTGAACAATCACATTCACGGGGATCTAATAGGAAAGCATCACGTTCCAAGAAAGGTTCAAACAAGGGTAAAAGTCTAAGTACTACGGTAGATTTATGGGCTTTATTAACTCAATGTGCACAAGCTGTTGGTAGCTATGATCAAAGGAATGCTAATGACATACTCAAGCAGATTAGGCAGAACTCTTCACCTCAAGGTGATGGACTTCAGCGTTTGGCTCATTACTTTGCTGATGGGCTGGAGGCGCGGTTATCTGCTGGTACGCCAATGTATAAACTCCTTGAGTCGTCTTCTGCAGATATGTTAAGAGCTTATAAAGTTTACATCACAGCGTCTCCATTTCAAAGGATGTCGAATTTCTTGGCCAACAGAACTATTCTGAATCTGGTGGAAAACAAAAGCAGCGTTCACATTATTGACTTTGGGATTTTCTATGGCTTTCAGTGGCCTTGTCTCATTCAGCGTCTTTCGGAAAGAGCCGGTGGGCCTCCGAAGCTTCGTATTACAGGAATTGATCTTCCTCAGCCAGGATTTAGGCCTGCAGAGAGGGTTGAGGAGACGGGTCGGCGACTTGAGAAGTACTGTAAGAGGTTCAACGTTCCATTTGAGTACAACTGCCTTGCACAGAAATGGGACACTGTAAGACTTGAAGATCTCAAGATTGATAGAGAAGAAGTGACAGTGGTTAACTGTTTATACAGAATGAAGAACCTCTATGATGAAACGGTGACCACAAATTGTCCGAGAGATGATGTGTTGAGGTTGATCAGGAGGATTAATCCAAGCATCTTCATACATGGTGTAGTGAATGGAACTTATAATGCACCATTTTTTCTGACTAGGTTCAGGGAAGCAATGTTTCATTTCTCATCATTGTTTGATATGCTCGAAGCTACTGTGCCACGTGATGATCCATATAGGTTGATGTTTGAGAAAGGGTTATATGGAAGGGATGCAGTAAATGTGATAGCTTGTGAGGGGGCAGAGAGGGTTGAAAGGCCAGAGACTTACAAGAATTGGCAGGTTAGGAATAAGAGAGCAAGATTCAAGCAACTTCCATTGGCTCCTAAACTGGTGGACAGAGTGAAAGAAATGGTGAAGAAGGAATATCCAAAAGATTTTGTAGTTGATGAAGATGGAAAGTGGGTTCTGCACGGTTGGAAAGGACGTATTCTGCAAGCTGTTTCTTGTTGGGTTCCTGCTTAA 1818 0.4065 MFSADTLVENFPGSVNRCMFGNIPVSVFSNQNPENGFDFEDSVSVSISPSTHSESVTDSVPSSGISSNGNDLGAGTGNGTSTSSESYSNCSYTTDNSIVDCDSPENNACEVFDRIPHDPFREVEAVFSFPNGAWKMNEESNNNNMVLGPRGSREKRGHLMNDIGIDERSYKVSAVYSDDSDLSEMFDEVLLCNDGKSPSIFCSNPEQSHSRGSNRKASRSKKGSNKGKSLSTTVDLWALLTQCAQAVGSYDQRNANDILKQIRQNSSPQGDGLQRLAHYFADGLEARLSAGTPMYKLLESSSADMLRAYKVYITASPFQRMSNFLANRTILNLVENKSSVHIIDFGIFYGFQWPCLIQRLSERAGGPPKLRITGIDLPQPGFRPAERVEETGRRLEKYCKRFNVPFEYNCLAQKWDTVRLEDLKIDREEVTVVNCLYRMKNLYDETVTTNCPRDDVLRLIRRINPSIFIHGVVNGTYNAPFFLTRFREAMFHFSSLFDMLEATVPRDDPYRLMFEKGLYGRDAVNVIACEGAERVERPETYKNWQVRNKRARFKQLPLAPKLVDRVKEMVKKEYPKDFVVDEDGKWVLHGWKGRILQAVSCWVPA 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00762 605 Pfam GRAS domain family 238 602 IPR005202 -
Vifa6g00762 605 MobiDBLite consensus disorder prediction 202 229 - -
Vifa6g00762 605 ProSiteProfiles GRAS family profile. 227 603 IPR005202 -
Vifa6g00762 605 MobiDBLite consensus disorder prediction 40 89 - -
Vifa6g00762 605 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 197 596 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00762 Vifa-Chr6 269964531 269966504 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00762 165 605 GRAS Transcription Factor Family AT1G07530 54.525 9.28e-176 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vifa6g00762 GRAS 5.4e-113 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00762 - - lja:Lj3g3v3213190.1 765.763