Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa6g00735 | ATGGCTGGAAAAGGTGAAGGTCCTGCAATCGGAATCGATTTAGAACGCTTGATCGGTGATGCTGCCAAGAATCAAGTTGCTATGAACCCTATCAACACTGTTTTCGATGCTAAGCGTTTAATTGGAAGACGATTTAGCGATGTTTCGGTACAGAGTGACATGAAGTTGTGGCCATTTAAGGTGATTCCTGGTCCTGGTGACAAGCCAATGATTGTGGTGAACTATAAAGCTGAAGAGAAACAGTTTTCTGCTGAGGAGATATCTTCCATGGTTCTGATGAAGATGAAGGAGATCGCGGAGGCTTATCTAGGTACAACGATTAAGAATGCTGTTGTTACTGTGCCGGCTTACTTTAATGATTCACAGCGTCAGGCTACTAAGGATGCTGGTGTGATTTCGGGGCTGAATGTGATGAGGATCATTAATGAGCCCACTGCTGCTGCTATTGCTTATGGTCTTGATAAGAAAGCTACGAGTACTGGTGAGAAGAATGTTCTTATTTTTGATCTTGGTGGTGGGACTTTTGATGTTTCGCTGCTTACTATTGAGGAAGGTATTTTTGAAGTGAAAGCTACTGCTGGTGATACACATTTGGGAGGTGAGGATTTTGATAACAGAATGGTGAACCATTTTGTTCAGGAGTTTAAGAGGAAGAATAAGAAGGATATTAGTGGAAACCCTAGGGCTCTTAGGAGGTTAAGAACTGCTTGTGAGAGGGCTAAGAGGACACTTTCCTCTACAGCTCAAACCACTATTGAAATTGATTCATTGTTTGAGGGTATTGATTTTTACACTACCATTACCCGTGCTCGATTTGAAGAGCTTAACATGGATCTGTTTAGGAAATGTATGGAGCCGGTTGAGAAGTGTTTGAGGGATGCTAAGATGGATAAGAACACTGTCCATGATGTTGTTCTTGTTGGTGGGTCTACGAGGATTCCTAAAGTTCAACAGCTTTTGCAAGATTTCTTTAATGGAAAGGAGCTTTGCAAGAGCATTAACCCTGATGAGGCTGTGGCTTATGGTGCGGCTGTTCAAGCTGCTATTTTGAGCGGTGAAGGGAATGAGAAAGTGCAAGATCTGTTGTTGCTTGATGTTACTCCTCTTTCGCTTGGTTTGGAAACCGCTGGAGGGGTTATGACTGTGTTGATTCCGAGGAACACAACAATTCCTACCAAGAAAGAGCAAGTGTTTTCAACCTACTCTGATAATCAACCTGGTGTGTTGATTCAGGTTTATGAAGGAGAAAGAACAAGGACTCGTGATAACAATTTGTTGGGCAAATTTGAGTTGTCTGGTATTCCACCTGCTCCAAGGGGTGTTCCTCAGATCACTGTCTGTTTCGACATTGATGCCAATGGTATTTTGAATGTCTCTGCAGAAGACAAAACTACAGGACAGAAGAACAAGATAACAATCACCAATGACAAGGGCAGGTTGTCGAAGGAAGAGATTGAGAAGATGGTGCAGGAAGCTGAGAAATATAAATCTGAAGATGAGGAGCACAAGAAGAAGGTGGAAGCCAAAAATGCACTTGAGAATTATGCCTATAACATGAGGAACACACTCAAAGATGAAAAGATTGCTTCCAAGTTGCCGGCGGTTGATAAGAAGAAAGTCGAAGATGCTATTGAGGAGGCTATTCAATGGCTGGATGGAAATCAACTTGCAGAGGCTGATGAGTTCGAAGACAAGATGAAGGAGCTGGAAGGTATTTGCAATCCTATCATTGCTAGGATGTACCAGGGTGCGGGTGGTGAAGCTGGTGGAGCAATGGATGATGATGGTCCTACTGCTGGTAGTGGAACTGGTGCTGGGCCTAAAATTGAGGAAGTCGATTAA | 1842 | 0.4305 | MAGKGEGPAIGIDLERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDVSVQSDMKLWPFKVIPGPGDKPMIVVNYKAEEKQFSAEEISSMVLMKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGLDKKATSTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLFEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKNTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTLKDEKIASKLPAVDKKKVEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIARMYQGAGGEAGGAMDDDGPTAGSGTGAGPKIEEVD | 613 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa6g00735 | 613 | FunFam | Heat shock 70 kDa | 199 | 282 | - | - | |
Vifa6g00735 | 613 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 507 | 588 | IPR029048 | - | |
Vifa6g00735 | 613 | Gene3D | - | 509 | 583 | IPR029048 | - | |
Vifa6g00735 | 613 | PRINTS | 70kDa heat shock protein signature | 173 | 183 | - | - | |
Vifa6g00735 | 613 | PRINTS | 70kDa heat shock protein signature | 441 | 457 | - | - | |
Vifa6g00735 | 613 | PRINTS | 70kDa heat shock protein signature | 110 | 130 | - | - | |
Vifa6g00735 | 613 | PRINTS | 70kDa heat shock protein signature | 301 | 317 | - | - | |
Vifa6g00735 | 613 | PRINTS | 70kDa heat shock protein signature | 360 | 379 | - | - | |
Vifa6g00735 | 613 | PRINTS | 70kDa heat shock protein signature | 8 | 21 | - | - | |
Vifa6g00735 | 613 | PRINTS | 70kDa heat shock protein signature | 333 | 353 | - | - | |
Vifa6g00735 | 613 | FunFam | Heat shock 70 kDa protein | 503 | 613 | - | - | |
Vifa6g00735 | 613 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 356 | 513 | IPR029047 | - | |
Vifa6g00735 | 613 | Gene3D | - | 35 | 90 | - | - | |
Vifa6g00735 | 613 | FunFam | Heat shock 70 kDa protein | 162 | 224 | - | - | |
Vifa6g00735 | 613 | Pfam | Hsp70 protein | 15 | 582 | IPR013126 | GO:0005524|GO:0140662 | |
Vifa6g00735 | 613 | FunFam | Heat shock 70 kDa | 355 | 509 | - | - | |
Vifa6g00735 | 613 | ProSitePatterns | Heat shock hsp70 proteins family signature 3. | 304 | 318 | IPR018181 | - | |
Vifa6g00735 | 613 | SUPERFAMILY | Actin-like ATPase domain | 160 | 352 | IPR043129 | - | |
Vifa6g00735 | 613 | MobiDBLite | consensus disorder prediction | 584 | 613 | - | - | |
Vifa6g00735 | 613 | FunFam | Heat shock cognate 70 kDa protein 2 | 283 | 330 | - | - | |
Vifa6g00735 | 613 | CDD | HSPA1-2_6-8-like_NBD | 13 | 351 | - | - | |
Vifa6g00735 | 613 | Gene3D | - | 15 | 348 | - | - | |
Vifa6g00735 | 613 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 15 | 547 | IPR013126 | GO:0005524|GO:0140662 | |
Vifa6g00735 | 613 | SUPERFAMILY | Actin-like ATPase domain | 12 | 155 | IPR043129 | - | |
Vifa6g00735 | 613 | Gene3D | Actin; Chain A, domain 4 | 199 | 282 | - | - | |
Vifa6g00735 | 613 | Coils | Coil | 485 | 505 | - | - | |
Vifa6g00735 | 613 | ProSitePatterns | Heat shock hsp70 proteins family signature 2. | 167 | 180 | IPR018181 | - | |
Vifa6g00735 | 613 | FunFam | Heat shock 70 kDa protein | 35 | 90 | - | - | |
Vifa6g00735 | 613 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 355 | 508 | IPR029047 | - | |
Vifa6g00735 | 613 | Gene3D | - | 156 | 330 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa6g00735 | Vifa-Chr6 | 262679603 | 262681652 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa6g00735 | 1 | 613 | Calmodulin-binding Proteins | AT3G12580 | 87.097 | 0.0 | 1130 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa6g00735 | K03283 | - | twl:119990582 | 1122.84 |