Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00734 ATGGCGAAGACACTGATTTCTTCTCCATCATTCATCGGTACTCCACTTCCTTCACTTCATCGCAGTTTCTCCCCGAATCGCACCAGGCTGTTCACCAAAGTTCAGTTCAGTTTACACCAACTCCCTCCAATTCAATCCGTAAGTCATTCGGTTGACTTGTCCGGAATCTTCGCTAGAGCTGAAGGTTTACTTTACACGCTCGCCGATGCTACTGTTGCGGCGGATGCTGTTGGTTCTAGTGATGTTGCCGTGCAGAAGAGCGGAGGTTGGTTCGGGTTTATTTCTGATGGAATGGAGTTTGTTCTCAAGGATGGTTTGTCTGCCGTGCATGTGCCTTACTCATATGGATTTGCTATCATATTACTCACTGTTATTGTTAAGGCTGCTACACTTCCCTTGACAAAGCAACAGGTTGAATCAGCACTAGCTATGCAAAACCTTCAACCTAAAATTAAGGCAATTCAAGAAAGATATGCCGGCAATCAGGAAAGAATACAACTTGAGACTTCAAGGCTATATACCCAGGCTGGGGTTAACCCGTTGGCAGGTTGTTTACCAACCTTGGCTACTATTCCAGTCTGGATTGGTCTATACCAAGCTTTATCTAATGTGGCAAATGAGGGATTGTTAACAGAAGGTTTCTTATGGATCCCTTCTCTGGGTGGTCCCACTAGCATTGCTGCTAGACAAAGTGGATCTGGAATTTCTTGGCTTTTTCCGTTTGTGGATGGCCATCCACCTTTGGGTTGGCCGAACACTGCAGCATATCTTGTTTTACCTATTCTTCTTATTGTTTCTCAATATGTTTCAATGGAAGTCATGAAACCCCCTCAGACAAATGATCCTAATCAAAAGAGTACACTTGTTATTTTAAAGTTTCTCCCACTCATGATCGGCTACTTCTCGTTATCTGTCCCATCTGGACTAACAATTTACTGGTTTACAAATAATGTCCTTAGCACAGCTCAACAAATATGGTTGCGCAAACTAGGAGGTGCAAAGCTCGCTGTTAATGAAAATGCTGGTGGAATTATTACTGCTGGACGAGCTAAGAGATCAGCTTCTAAGCCAGAAAAGGGTGGTGAAAGGTTTGCACAGTTAAAAGAAGAGGAGAAGAAGAAAAAGCTACTTAAGGCACTCCCAGTGGAGGAAGTTCAGCCTTTGGCGTCTGCTTCAGCTTCTAATGATGGCTCAGATGTAGAAAACAACAAGGAACAAGAAGTTACAGAAGAGTCGAACACTTCTAAAGTTAGCCAAGTGGCTCAAAGTTTTTCTAGGGAAAGAAGAAGTAAGCGTTCAAAGCGGAAGCCTGTTGCATGA 1320 0.4348 MAKTLISSPSFIGTPLPSLHRSFSPNRTRLFTKVQFSLHQLPPIQSVSHSVDLSGIFARAEGLLYTLADATVAADAVGSSDVAVQKSGGWFGFISDGMEFVLKDGLSAVHVPYSYGFAIILLTVIVKAATLPLTKQQVESALAMQNLQPKIKAIQERYAGNQERIQLETSRLYTQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGGPTSIAARQSGSGISWLFPFVDGHPPLGWPNTAAYLVLPILLIVSQYVSMEVMKPPQTNDPNQKSTLVILKFLPLMIGYFSLSVPSGLTIYWFTNNVLSTAQQIWLRKLGGAKLAVNENAGGIITAGRAKRSASKPEKGGERFAQLKEEEKKKKLLKALPVEEVQPLASASASNDGSDVENNKEQEVTEESNTSKVSQVAQSFSRERRSKRSKRKPVA 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00734 439 MobiDBLite consensus disorder prediction 387 439 - -
Vifa6g00734 439 PANTHER OXA1 71 374 IPR001708 GO:0016020|GO:0032977
Vifa6g00734 439 NCBIfam membrane protein insertase YidC 114 328 IPR028055 -
Vifa6g00734 439 CDD 5TM_YidC_Alb3 116 329 IPR047196 -
Vifa6g00734 439 Pfam 60Kd inner membrane protein 115 329 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00734 Vifa-Chr6 262662621 262667852 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00734 23 385 Chloroplast and Mitochondria Gene Families AT2G28800 68.194 1.31e-176 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00734 K03217 - gmx:100817173 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g00734 6 262662621 262667852 Vifa6g00734 6 262662621 262667852 ECH