Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00733 ATGGCGAAGACACTGATTTCTTCTCCATCATTCATCGGTACTCCACTTCCTTCACTTCATCGCAGTTTCTCCCCGAATCGCACCAGGCTGTTCACCAAAGTTCAGTTCAGTTTACACCAACTCCCTCCAATTCAATCCGTAAGTCATTCGGTTGACTTGTCCGGAATCTTCGCTAGAGCTGAAGGTTTACTTTACACGCTCGCCGATGCTACTGTTGCGGCGGATGCTGTTGGTTCTAGTGATGTTGCCGTGCAGAAGAGCGGAGGTTGGTTCGGGTTTATTTCTGATGGAATGGAGTTTGTTCTCAAGGTGTTAAAGGATGGTTTGTCTGCCGTGCATGTGCCTTACTCATATGGATTTGCTATCATATTACTCACTGTTATTGTTAAGGCTGCTACACTTCCCTTGACAAAGCAACAGGTTGAATCAGCACTAGCTATGCAAAACCTTCAACCTAAAATTAAGGCAATTCAAGAAAGATATGCCGGCAATCAGGAAAGAATACAACTTGAGACTTCAAGGCTATATACCCAGGCTGGGGTTAACCCGTTGGCAGGTTGTTTACCAACCTTGGCTACTATTCCAGTCTGGATTGGTCTATACCAAGCTTTATCTAATGTGGCAAATGAGGGATTGTTAACAGAAGGTTTCTTATGGATCCCTTCTCTGGGTGGTCCCACTAGCATTGCTGCTAGACAAAGTGGATCTGGAATTTCTTGGCTTTTTCCGTTTGTGGATGGCCATCCACCTTTGGGTTGGCCGAACACTGCAGCATATCTTGTTTTACCTATTCTTCTTATTGTTTCTCAATATGTTTCAATGGAAGTCATGAAACCCCCTCAGACAAATGATCCTAATCAAAAGAGTACACTTGTTATTTTAAAGTTTCTCCCACTCATGATCGGCTACTTCTCGTTATCTGTCCCATCTGGACTAACAATTTACTGGTTTACAAATAATGTCCTTAGCACAGCTCAACAAATATGGTTGCGCAAACTAGGAGGTGCAAAGCTCGCTGTTAATGAAAATGCTGGTGGAATTATTACTGCTGGACGAGCTAAGAGATCAGCTTCTAAGCCAGAAAAGGGTGGTGAAAGGTTTGCACAGTTAAAAGAAGAGGAGAAGAAGAAAAAGCTACTTAAGGCACTCCCAGTGGAGGAAGTTCAGCCTTTGGCGTCTGCTTCAGCTTCTAATGATGGCTCAGATGTAGAAAACAACAAGGAACAAGAAGTTACAGAAGAGTCGAACACTTCTAAAGTTAGCCAAGTGGCTCAAAGTTTTTCTAGGGAAAGAAGAAGTAAGCGTTCAAAGCGGAAGCCTGTTGCATGA 1329 0.4342 MAKTLISSPSFIGTPLPSLHRSFSPNRTRLFTKVQFSLHQLPPIQSVSHSVDLSGIFARAEGLLYTLADATVAADAVGSSDVAVQKSGGWFGFISDGMEFVLKVLKDGLSAVHVPYSYGFAIILLTVIVKAATLPLTKQQVESALAMQNLQPKIKAIQERYAGNQERIQLETSRLYTQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGGPTSIAARQSGSGISWLFPFVDGHPPLGWPNTAAYLVLPILLIVSQYVSMEVMKPPQTNDPNQKSTLVILKFLPLMIGYFSLSVPSGLTIYWFTNNVLSTAQQIWLRKLGGAKLAVNENAGGIITAGRAKRSASKPEKGGERFAQLKEEEKKKKLLKALPVEEVQPLASASASNDGSDVENNKEQEVTEESNTSKVSQVAQSFSRERRSKRSKRKPVA 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00733 442 PANTHER OXA1 70 377 IPR001708 GO:0016020|GO:0032977
Vifa6g00733 442 CDD 5TM_YidC_Alb3 119 332 IPR047196 -
Vifa6g00733 442 NCBIfam membrane protein insertase YidC 117 331 IPR028055 -
Vifa6g00733 442 Pfam 60Kd inner membrane protein 118 332 IPR028055 -
Vifa6g00733 442 MobiDBLite consensus disorder prediction 390 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00733 Vifa-Chr6 262662621 262667852 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00733 23 388 Chloroplast and Mitochondria Gene Families AT2G28800 68.733 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00733 K03217 - gmx:100817173 650.588