Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00709 ATGTCTTTACAAAACAAGGGATTCTGGATGGGAAAAGGATCTGGACATGTTAGTGACAGAGAGCCGGTATTTGATAATCCTTCCAAAACTGAACCAAAACGACCTCATCAATGGTTAATTGATGCAGCTGAAGGGGATTATTTGCCAAACAAGAAGCAAGCAATAGAAGATGCAAATGAAAGATCTAGTTCAGGATTTTCAAATGTAAATTTTTCCCCGTGGGAGAACAATCATAATTTCAATTCAGTCCCAAACCAGTTTATTGATCGGTTATTTGGATCTGAAACTAGGCCTGTCAATTTCTCTGAAAAGAATACTTATGTTTCTGCTGATGAGTCTAATGTGAGGTCAAATTTGATCCCCAATCATTATGGAGATGGTGCATCTTTTGGCTTGTCTATATCTCATTCTGCTGAAGATTCTGAACCGTGTATGACTTTTGGGGGAATCAAGAAAGTCAAAGTAAATCAAGTTAAGGATTTCGACATTGTACAAGCTCCAGAAGGACATGGCTTTGATAGGCAGAGTAAGGGTGATCTACATCAAGCCTATAATGGGGAAATTGAGACGAGATCTGGGTCAATAGGGCAAGCCTTTGACAAGGATGGCAATGTCACTTTACAGGGACTCACCTATGGCAGAGGGGATGCCCATATAAGATCGTTTGGTACCCCCTTTGGCAAAGGAGATAACACACTCCAATCAATTGGTGAATCCTATAATAAAGAGGACAAAAATATAATTTCTTTTGGTGGGTTCCCAGATGAACGGGGCACTGTCTCTGTGGGCAGGGCTACTGTGGACTATGAACAATTATATAATCAACCATCAGTTCATGTGTCAACAACAGCCCATGAGAAAGAGTTGAATGCATCAAATTCCGGTGTAGTTGAAAGTACTCCTTCGGTGGCAACAATAAAGCCTGAATCTGTGACCAAGAATAAACAAGATATCAAAAGGAAAGAATCTCCAACCACCTTCCCAACTAATGTCCGGAGCTTGATATCTACTGGTATGCTTGATGGTGTTCCTGTGAAGTATGTCTCAGTGGCGCGGGAGGAACTTCGTGGGATTATAAAAGGCTCTACCTATCTTTGTGGGTGTCAGTCATGTAACTATTCTAAGGGTCTGAATGCTTATGAGTTTGAAAGGCATGCCGGTTGCAAAACAAAACATCCAAACAATCATATTTATTTTGAGAATGGGAAGACCATTTATCAAATAGTACAAGAATTGAGAAATTCCCCGGAGAGTTCATTGTTTGACACAATTCAAACAATTTTCGGTGCACCAATTAATCAGAAGGCATTTCGCATTTGGAAAGAATCATTTCAAGCAGCAACACGTGAGCTTCAGCGTATTTATGGAAATGAAAGACGCAATCTCTAA 1389 0.4017 MSLQNKGFWMGKGSGHVSDREPVFDNPSKTEPKRPHQWLIDAAEGDYLPNKKQAIEDANERSSSGFSNVNFSPWENNHNFNSVPNQFIDRLFGSETRPVNFSEKNTYVSADESNVRSNLIPNHYGDGASFGLSISHSAEDSEPCMTFGGIKKVKVNQVKDFDIVQAPEGHGFDRQSKGDLHQAYNGEIETRSGSIGQAFDKDGNVTLQGLTYGRGDAHIRSFGTPFGKGDNTLQSIGESYNKEDKNIISFGGFPDERGTVSVGRATVDYEQLYNQPSVHVSTTAHEKELNASNSGVVESTPSVATIKPESVTKNKQDIKRKESPTTFPTNVRSLISTGMLDGVPVKYVSVAREELRGIIKGSTYLCGCQSCNYSKGLNAYEFERHAGCKTKHPNNHIYFENGKTIYQIVQELRNSPESSLFDTIQTIFGAPINQKAFRIWKESFQAATRELQRIYGNERRNL 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00709 462 PANTHER AUTOIMMUNE REGULATOR 8 160 - -
Vifa6g00709 462 MobiDBLite consensus disorder prediction 1 33 - -
Vifa6g00709 462 Pfam Tify domain binding domain 357 412 IPR032308 -
Vifa6g00709 462 MobiDBLite consensus disorder prediction 18 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00709 Vifa-Chr6 260372600 260376003 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00709 308 445 PHD Transcription Factor Family AT3G53680 49.645 2.18e-38 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00709 - - tpra:123918512 769.229