Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00701 ATGATTTCTCTTACCTTCTTTTTAGCTACGATTGCGTTCCTCGTTTTCGTTCTTCAACTTTTCTCATACTTCAAAAGAAACAAAAAATCTCATCCTAATTTACTACCTCACCCTCCAAGTCCACCAGCAATACCAATATTTGGCCATCTTCATCTCCTCAAACCACTCATTCATCATGCCTTCCGCGACCTCTCCGATCGATATGGCCCTCTTATATCCCTTCGACTTGGCTCCGCTCGGTTCATCGTTGTTAACACTCCATCACTCGCCAAAGAGTTTCTCAAAAATAATGAGCTAACTTTCTCGCATCGTAAAATGAACATAGCCATCAACATGATTGCTTATGATGATGCAACTTTTGCTTTCGCCCCTTATGGAGAATATTGGAAATTCATTAAAAAGCTCAGCACTACTGAGCTTTTAGGTAGCCGAACAATAGGACAATTCCTACCAATCCGAACGCGGGAACTCCAACAACTCATTCAAACATTGGCGAAAAAATCTAAGGCTGAAGAAAGTGTGAACCTTTCCCAAGCTTTGTTGAAGCTTTCTAACAACATAATATCAAAGATGATGCTGAGCATTGAGGCCTCAGGGACAGACAACCAAGCAGAAGAAACTAGGGCTTTAGTTCGCGAGGTAACAGAAATATTCGGCGAGTTTAATGTTTCGGATTTTATAGGAATTTTCAAGAACTTCGACTTGAAAAGTTTAAAAAAAAGAGCCTTGAACATACACAAGAGGTATGATGCTTTGTTGGAGAAGATTATTTCTGATCGCGAGAATTCGAGAAGAATAGCCAAGTTAGAAGGTGGTTGTGAGGATGAAGAGAAAGTGAAAGATTTTCTAGACATTTTGCTTGATGTCTCTGACGAGAAAGACTACGAAGTAAATTTTACTAGAAACCATATCAAATCATTGATCTTGGATTACTTTACAGCGGCTACTGATACTACTGCCTTATCATTAGAATGGACAGTATCAGAACTGTTTAACAATCCAAAGGTGTTGAAAAAAGCTCAAGAAGAAGTTGAGAGAGTAACAAGAAATGAAAGACTAGTGTGTGAAGCAGATAGTTCAAACCTTCCTTATATACATGCAATCATAAAAGAAACAATGAGGCTTCACCCTCCGATACCGATGTTAATGAGGAAAGGATCAGAAGATTGTGTTGTTGATGGAAAAATGATTCCAAAAGGATCATTGGTTTGCATGAACATTTGGGCTATGGGAAGAGACGAAAAGATATGGGGAAATCCATTAGAGTTTAGGCCAGAGAGATTCATAGGAAGTGATATAGATGTGAAAGGACATCACTTTGAGTTGTTGCCATTTGGTTCTGGAAGGAGGGCTTGCCCTGGTATGCCTTTGGCCATGCGTGAATTGCCAACTTTTATTGGAGCTTTGGTGCAATGCTTTGAGTGGAAGATGTTTGATTCTGAGAGTAAAATCTTAGCTTATGGAAAAAATATTGATATGGATGAACGGCCAGGATTGACGGCTCCTAGGGCTAATGATCTTATTTGTATTCCAGTTGCAAGGTTCAATCTTGATCCTTTGCTTCAACTTTAG 1572 0.3931 MISLTFFLATIAFLVFVLQLFSYFKRNKKSHPNLLPHPPSPPAIPIFGHLHLLKPLIHHAFRDLSDRYGPLISLRLGSARFIVVNTPSLAKEFLKNNELTFSHRKMNIAINMIAYDDATFAFAPYGEYWKFIKKLSTTELLGSRTIGQFLPIRTRELQQLIQTLAKKSKAEESVNLSQALLKLSNNIISKMMLSIEASGTDNQAEETRALVREVTEIFGEFNVSDFIGIFKNFDLKSLKKRALNIHKRYDALLEKIISDRENSRRIAKLEGGCEDEEKVKDFLDILLDVSDEKDYEVNFTRNHIKSLILDYFTAATDTTALSLEWTVSELFNNPKVLKKAQEEVERVTRNERLVCEADSSNLPYIHAIIKETMRLHPPIPMLMRKGSEDCVVDGKMIPKGSLVCMNIWAMGRDEKIWGNPLEFRPERFIGSDIDVKGHHFELLPFGSGRRACPGMPLAMRELPTFIGALVQCFEWKMFDSESKILAYGKNIDMDERPGLTAPRANDLICIPVARFNLDPLLQL 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00701 523 SUPERFAMILY Cytochrome P450 38 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00701 523 FunFam Cytochrome P450 family protein 28 509 - -
Vifa6g00701 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Vifa6g00701 523 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00701 523 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00701 523 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00701 523 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00701 523 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00701 523 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00701 523 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00701 523 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00701 523 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00701 523 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00701 523 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00701 523 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00701 523 Gene3D Cytochrome P450 26 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00701 523 PANTHER STEROID 21-HYDROXYLASE-RELATED 15 504 - -
Vifa6g00701 523 Coils Coil 235 255 - -
Vifa6g00701 523 Pfam Cytochrome P450 38 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00701 Vifa-Chr6 257059872 257061884 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00701 1 514 Cytochrome P450 AT5G06900 40.698 2.22e-143 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00701 K23179 - gmx:100784036 757.673