Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00698 ATGGTTTCTCAACCGATCTTATTAGCTCTATTTCTAGTCCTCTTTGTTTTCCTTCTCAAACTTTTTTTGTCTAAAAAATACAACAAATCAAAGGAGTATAATGTACCTTACCCTCCAAGTCCACCAGCAATACCAATAATTGGCCATCTTCATCTCCTCAAACCACTCCTTCACCATGCCTTCCGCGACCTCTCCGATCGATATGGCCCTCTTATATCCCTTCGACTTGGCTCCGCTCGGTTCATCGTTGTTAACACTCCATCGCTCGCTAAAGAGATCCTCAAAACAAATGAGCTCGTTTATTCTTCTCGAAAAATGAACATTGTCATCAACACTGTTGTCTATGATAATGCTACTTTTGCTTTTGCCCCTTATGGGACATATTGGAAATTCATTAAAAAGCTAAGCACTTTTGAGCTATTAGGAAATCAAACCCTAGGACAGTTTTTACCAATTAGAACCCGAGAACTCCACGAGTTCATTCGCACTTTGGCGAATAAATCAAAATTTGAAGATAGCTTGAATCTCACGCAAGCTTTGATGACACTTTCTAACAACATAATATCGCGAATGATGTTGAGCATTGAGACCTCGGGGACAGACAGCCAGGCCGAACAAGCTAGGGTTTTGGTTCGCGAGGTGACACTGTCTTTCGGGGAATTTAACATTTCAGATTTTATAGGATTTTGCAAAAACTTCGACTTGCAAGGTCTCAAAAAGAAGGCTTTGGATTTACATAAGAGGTATGATGCTTTTTTGGAAAAAATCATATGTGATCGGGAAGAGTCGAGAAAGAAATTCAAGGTTGAGGGTGAATCATGTGTTAATGAAGAAGAAAAAGTGAAGGATTTTCTTGATATTTTGCTTGATGTTTCTGAGGCAAAAGATTCTGAAGTTGACTTTACTAGGAACCATATTAAATCATTGATCTTGGATTACTTCACAGCAGCTACAGATACTACTGCTATATCATTAGAATGGGCAATAGCAGAATTGTACAACAATCCAATGGTGCTAAAGAAAATGCAAGAGGAGGTGGACATGGTAGTAGGGAAGGAAAGACTAGTGTGTGAAGCAGACATTTCAAATCTTCCATATACAAATGCTGTTATAAAAGAAACAATGAGGCTTCACCCGCCGCTACCGATGATTGCTAGAAAAGGAGTAGAAGATTGTGTGGTTGATGGAAACATGATTCCTAAAGGATCAATAGTTTGCGTAAACGTTTGGGCTATGGGAAGAGACGAAAAGATATGGGAAAATCCATTAGAGTTTAGGCCAGAGAGATTCATAGAAAGTGATATAGATGTGAAAGGACATAACTTTGAGTTGTTGCCATTTGGTTCTGGAAGGAGGGCTTGCCCCGGTATGCCTTTGGCCATGCGTGAATTGCCAACTGTGATGGGAGCTTTGGTGCAATGCTTTGAGTGGAAGATGACTGATTCTGAGAGTAAAATCTTAGGTTATGGAAAAAAGATTGATATGGATGAACGGCCAGGATTGACTGCTCCTAGGGCTAATGATCTTTTCGGCATTCCAGTTGCAAGGTTGAATCCGATTCCTTTTCTTCAAGTGTAG 1578 0.3999 MVSQPILLALFLVLFVFLLKLFLSKKYNKSKEYNVPYPPSPPAIPIIGHLHLLKPLLHHAFRDLSDRYGPLISLRLGSARFIVVNTPSLAKEILKTNELVYSSRKMNIVINTVVYDNATFAFAPYGTYWKFIKKLSTFELLGNQTLGQFLPIRTRELHEFIRTLANKSKFEDSLNLTQALMTLSNNIISRMMLSIETSGTDSQAEQARVLVREVTLSFGEFNISDFIGFCKNFDLQGLKKKALDLHKRYDAFLEKIICDREESRKKFKVEGESCVNEEEKVKDFLDILLDVSEAKDSEVDFTRNHIKSLILDYFTAATDTTAISLEWAIAELYNNPMVLKKMQEEVDMVVGKERLVCEADISNLPYTNAVIKETMRLHPPLPMIARKGVEDCVVDGNMIPKGSIVCVNVWAMGRDEKIWENPLEFRPERFIESDIDVKGHNFELLPFGSGRRACPGMPLAMRELPTVMGALVQCFEWKMTDSESKILGYGKKIDMDERPGLTAPRANDLFGIPVARLNPIPFLQV 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00698 525 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00698 525 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00698 525 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00698 525 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00698 525 PANTHER STEROID 21-HYDROXYLASE-RELATED 15 506 - -
Vifa6g00698 525 SUPERFAMILY Cytochrome P450 38 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00698 525 FunFam Cytochrome P450 family protein 29 511 - -
Vifa6g00698 525 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00698 525 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00698 525 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00698 525 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00698 525 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00698 525 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00698 525 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00698 525 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00698 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Vifa6g00698 525 Gene3D Cytochrome P450 22 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00698 525 Pfam Cytochrome P450 38 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00698 Vifa-Chr6 256721130 256722869 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00698 35 516 Cytochrome P450 AT5G06900 42.149 8.58e-137 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00698 K23179 - gmx:100783503 746.888