Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00692 ATGCCTAGAAAAGGAATGAGAAGCATATTCTTCCATCAATCTTCTCCTTCAATTCCTTCATTGTTTCCACCACCCTCTCCTCTCCGCACTTTCTCAGACTCATTAATCGATGAAAACATCGAAACTGCGGAATCGCTTATAACCAAATGGGATTATTCCAACGCGAATCAATCCAAACAACTCCTTACCCCTCTTTTCAGCGCCAGCACTCACCATGAAGCGAGGCAGTATCTTAACGCTGTAAAAGGACTACAATCTGCTATGCAGTACCTCGTCACACGTGATTCCACCTCTAGCACACTAGTAAAAGCTCAATTTCTAATGCAACTCGCTATGAAAACTCTCCAGAAAGAGTTTTATCGGATTCTCTCAGAAAACAGAGAATGTTTGGATCCTGAATCTGTCTCCAACCGTTCCTCGGTCGATCGTAGGAGAAGCAGTGTTAGTCTTTCCGATTACGACGATGATGTATCCGTCTCCATCTCCGTCTCCGACGGCGAGTTTCGTATAGCTGGTAATACGATTTCTGAGACCGAGCGGGTTTCCATGCTTGCTATGGCGGACTTGAAAGCTATTGCTGATTGCATGATTTCGTCTGGATACGGAAAAGAGTGTGTCAGGGTTTATATAGTTATGAGAAAGTCTATCGTTGATGAAGCTCTTTATCATCTCGGAGTTGAACGGTTGAGCTTCTCTCAGATTCAGAAAATGGATTGGGAAGTGATTGATTTAAAAATCAAGACGTGGTTGAACGCTGTTAAAGTCGCCGTCGGGACACTCTTTCACGGCGAGAGAATCCTCTGCGACGATGTCTTCGCTAACTCTTCAGGAAAGAGAATCGCCGAGTCCTGTTTCGCGGAGATTACAAAAGAAGGTGCAGCGTTTTTGTTTAGCTTCCCGGAGATGGTGGCGAAATGCAAGAAAACTTCAGAGAAAATGTTCAGAACTCTTGATTTATACGAAGCTATCTCCGATCTCTGGCCACAAATTCAATCAATTTTCTCTTTTGAATCAACCTCAACTGTCTTATCACAAGCCGTTACATCAATGACAAAACTCGCAGACGCTGTGAAAACGATGCTAACGGATTTCGAATCGGCGATTCAGAAAGAGTCATCAAAGAAAGAACTCCCCGGCGGCGGAGTCCATCCTATAACACGCTATGTCATGAATTACATCACCTTCCTCGCCGATTACAGCGGCGTGTTATCCGATATAGTTTTCGATTTGCCGCAATCTCCGTTGCCGGAGTCTTACTTCCAAAGCCCCGTGCGCGGCGAGAATCAATCATCTTCAGAGATATCAGAGAAAATCGCGTGGCTGATACTCGTTCTTCTCTGTAAACTTGACGTGAAAGCAGAGCTATACAAGGATGTAGCACTTTCCTATCTTTTTCTTGCTAACAACATGCAATACGTCGTCGTAAAGGTTCGAAGATCGAATTTAGGGTTTCTTCTCGGACAAGATTGGTTAACGAATCATGAACTGAAAGTTAAAGAGTATGTGTCAAAATTTGTGCGATACGGATGGAATAAAGTAATCTCCACGTTGCCGGAGAATCCCACGGCGGAGATGGCGGTGGAGAGAGTAAATGCTAGCTTCGTTAACTTCAACGCTGCGTTTGATGGAGAGTGTAGGAAACAGTCTTCATGGGTTGTATCCGACCCGAAACTGCGAGATGAAATCAAAGGAGCGCTTGGTTCGGAGCTGTTGCCGAGGTACAGTGAATTCTATCAGATGAACCGGGTTGGGTTCGAATCGATAGTGAGATATGAACCGGAATATATAGAAAGTTGTTTGGGTAAAATTTTGTATGGGGTTGGAGATTCGGGGAGTGTTTCGTCTTTTTCTTCGAGGACGTCGTCTTCTTCTCGTGGCTCTAATCGCCGGTGA 1893 0.4464 MPRKGMRSIFFHQSSPSIPSLFPPPSPLRTFSDSLIDENIETAESLITKWDYSNANQSKQLLTPLFSASTHHEARQYLNAVKGLQSAMQYLVTRDSTSSTLVKAQFLMQLAMKTLQKEFYRILSENRECLDPESVSNRSSVDRRRSSVSLSDYDDDVSVSISVSDGEFRIAGNTISETERVSMLAMADLKAIADCMISSGYGKECVRVYIVMRKSIVDEALYHLGVERLSFSQIQKMDWEVIDLKIKTWLNAVKVAVGTLFHGERILCDDVFANSSGKRIAESCFAEITKEGAAFLFSFPEMVAKCKKTSEKMFRTLDLYEAISDLWPQIQSIFSFESTSTVLSQAVTSMTKLADAVKTMLTDFESAIQKESSKKELPGGGVHPITRYVMNYITFLADYSGVLSDIVFDLPQSPLPESYFQSPVRGENQSSSEISEKIAWLILVLLCKLDVKAELYKDVALSYLFLANNMQYVVVKVRRSNLGFLLGQDWLTNHELKVKEYVSKFVRYGWNKVISTLPENPTAEMAVERVNASFVNFNAAFDGECRKQSSWVVSDPKLRDEIKGALGSELLPRYSEFYQMNRVGFESIVRYEPEYIESCLGKILYGVGDSGSVSSFSSRTSSSSRGSNRR 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00692 630 Pfam Exo70 exocyst complex subunit 248 600 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vifa6g00692 630 SUPERFAMILY Cullin repeat-like 55 602 IPR016159 -
Vifa6g00692 630 PANTHER EXOCYST COMPLEX PROTEIN EXO70 30 600 IPR004140 GO:0000145|GO:0006887
Vifa6g00692 630 Gene3D Exocyst complex component Exo70 55 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00692 Vifa-Chr6 255779266 255781158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00692 23 606 EXO70 exocyst subunit family AT5G59730 48.768 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00692 K07195 - gmx:100810579 816.609