Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00627 ATGAAACGTGTTTTTATGGATGCAGAAGAAAGCCTGAGTAAGGTTGATAGCTTCTCTAGGTGGATGTCTACAGCATTTGCATCAGTGGATGATCTGCACATGCAGTCTTCCCTTGGTATTCCATGGGGCACAGATGAATGTGTTTTGAAGAGTAAACCAAATGTGGAAATATGTAATTGGTCCTGTATGTTTGGGGAAGTTGAAGTTCCAGCTACTGTTTTAGCTAATGGAATTCTATGCTGTCAAGCTCCACCTCTTGAGATTGGACTGATCCCTTTCCACGTAACTTTTTCCAATAGATTTGCTTGTAGTGAAGGTACCAGAAAGTATATTAAGTTGAAACGTAAGACAGATGCTGATCAATCTAGTTCTGGAACTCCTAAGAAATCAAAAACTGAACATGTTCCCTATGCTGATAAACAACCGAATCCTGGCACGGGCCTTGGGAAGGTGGTTATAAATGCAAGAGGCAGTTTACCAGCAAAGGCTAGCAGAAAGGATGTGAGGAAGTATGATGATTTTGGCTTACCCATTGATGATGATGATAGCTTACTAGTTCCTGAAAATAAAGAGGGTGATAGGCCACAGAAGACAACAAACCAACTCCTAACCGAAACTAACTCAACTGTAACCAGCTTTCCTTTTTTCCCACCTCTTAACCAAATTTTAACCATACCATAA 681 0.4053 MKRVFMDAEESLSKVDSFSRWMSTAFASVDDLHMQSSLGIPWGTDECVLKSKPNVEICNWSCMFGEVEVPATVLANGILCCQAPPLEIGLIPFHVTFSNRFACSEGTRKYIKLKRKTDADQSSSGTPKKSKTEHVPYADKQPNPGTGLGKVVINARGSLPAKASRKDVRKYDDFGLPIDDDDSLLVPENKEGDRPQKTTNQLLTETNSTVTSFPFFPPLNQILTIP 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00627 226 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 49 118 - -
Vifa6g00627 226 SUPERFAMILY E set domains 55 105 IPR014756 -
Vifa6g00627 226 Gene3D Immunoglobulins 39 112 IPR013783 -
Vifa6g00627 226 MobiDBLite consensus disorder prediction 114 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00627 Vifa-Chr6 238929580 238930386 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00627 1 105 CAMTA Transcription Factor Family AT5G64220 38.514 5.92e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00627 K21596 - gmx:100795682 147.902