Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00524 ATGACAGCCACCTCTACTCTACACTTCCTTTCTCGTCTCCGTTTCATACCTTTTCCTCTCCCATCACCACTCTCAACCCCTTTCCATTTCTCCCTCACCTCCAAAACAAAGACACCCACGCGGTTTCGATTTTTCTCAATGGCCGCCGCTGCTCAACCAAAGGAATCACCGGCTAACAACCCCGGTCTCCATTCAACTATAGATGAAGCTACTAAGGGTTACTTTATGCAACAAACTATGTATAGAATCAAAGACCCCAAAGTTAGTCTTGATTTTTACTCCCGCATTTTAGGCATGTCGTTGCTCAAGAGACTGGATTTTCCTGAGTTGAAGTTCAGCTTGTACTTTATGGGGTATGAGGATACATCTGAAGCTCCAACTAACCCTGTTGATAGAACAGTTTGGACCTTTGCTCAAAAGGCTACAATTGAATTGACACATAACTGGGGCACTGAAAGTGATCCAGAGTTCAAAGGGCACCACAATGGCAATTCTGATCCTCGTGGTTTTGGTAAGTGA 519 0.4451 MTATSTLHFLSRLRFIPFPLPSPLSTPFHFSLTSKTKTPTRFRFFSMAAAAQPKESPANNPGLHSTIDEATKGYFMQQTMYRIKDPKVSLDFYSRILGMSLLKRLDFPELKFSLYFMGYEDTSEAPTNPVDRTVWTFAQKATIELTHNWGTESDPEFKGHHNGNSDPRGFGK 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00524 172 CDD GlxI_Zn 76 171 - -
Vifa6g00524 172 PANTHER LACTOYLGLUTATHIONE LYASE GLYOXALASE I 32 171 - -
Vifa6g00524 172 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 63 166 IPR029068 -
Vifa6g00524 172 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 78 161 IPR004360 -
Vifa6g00524 172 Gene3D - 48 172 IPR029068 -
Vifa6g00524 172 MobiDBLite consensus disorder prediction 151 165 - -
Vifa6g00524 172 MobiDBLite consensus disorder prediction 150 172 - -
Vifa6g00524 172 NCBIfam lactoylglutathione lyase 76 171 IPR004361 GO:0004462|GO:0046872
Vifa6g00524 172 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 75 172 IPR037523 -
Vifa6g00524 172 ProSitePatterns Glyoxalase I signature 1. 78 99 IPR018146 GO:0004462|GO:0046872
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00524 13 171 Calmodulin-binding Proteins AT1G08110 68.902 7.79e-70 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00524 K01759 - gmx:100779383 273.478