Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00512 ATGGATCCTAATCATTTTCATTATCAACAAGCTATGTTCAATTACATGCAAAATAATCAAAATCCTAATTCTCAAAATGCTCAAATTTCATCGGTGTCAACAAATCCCGCCATATTTTTTCCGTCACCAAACAATCCAAATATATTTCCTAGCCCTCAAATGAATTCTAATAGTATGGAATTTTTTCGTCATGAACCGGAAATACCGATTGGATTTATGTCCGGTTGTCAACTTCCACCCTTTTCTACTCAAGTTGGTGCTGAAAAAGAAAAAAGGGATCCAATTGTGGGAGTTGATCAAAAGGCTGAGAGTTTTTGGGTAAGAGTCGCTGCCAATTATAACCAGTATCGTGGACAATCGCGGGAAAAGGTAGGGGGACAATTAAAATGTCGATGGCATCGAATAAATGGCATGGTTCAAAAATTTGTTGGGTGTTACAAACAAGCTGTTAATGGAAAGAAAAGTGGGACATTGGAGAACGATATCATGGCCTCTGCACATACTTTTTTTGCTCAGGATCAAGGTACAACATTCAATCTTGAGTACGCATGGCGACTGTTAACAGATGAACCTAAATGGATGGGAGAATCGATTGGAAGTTCTTCAAAAATAACAAAGACTTTCGCTAGTGGGGCATCATCAGAGAACCCAGATACACATTCAAGTTATGAGTTTAACTCATCATCACCAATGGAGCGTCCAATGGGACAAAAAGCGGAAAAAGGGAAGGGTAAGACAAATAATATTCCAACTGCAACAGAAGATGCAAGGAATAAAAGAACAACGACAATGGAAAGACTAGCGCAGTGTAAGGAGGACGAGATAGAAGTAAAGGTAATGCAAATCATGATGAAAGACACTTCTACTATGAGCGATAGTCAACGAGATATTCATGAAAAATATTGTAATAAGATGGAAAAAAAATATGGAATGTAG 936 0.3782 MDPNHFHYQQAMFNYMQNNQNPNSQNAQISSVSTNPAIFFPSPNNPNIFPSPQMNSNSMEFFRHEPEIPIGFMSGCQLPPFSTQVGAEKEKRDPIVGVDQKAESFWVRVAANYNQYRGQSREKVGGQLKCRWHRINGMVQKFVGCYKQAVNGKKSGTLENDIMASAHTFFAQDQGTTFNLEYAWRLLTDEPKWMGESIGSSSKITKTFASGASSENPDTHSSYEFNSSSPMERPMGQKAEKGKGKTNNIPTATEDARNKRTTTMERLAQCKEDEIEVKVMQIMMKDTSTMSDSQRDIHEKYCNKMEKKYGM 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00512 311 Pfam No apical meristem-associated C-terminal domain 177 295 IPR029466 -
Vifa6g00512 311 PANTHER - 64 308 - -
Vifa6g00512 311 MobiDBLite consensus disorder prediction 208 259 - -
Vifa6g00512 311 MobiDBLite consensus disorder prediction 208 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00512 Vifa-Chr6 197686627 197687645 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00512 92 274 Glutathione S-transferase Gene Family AT5G41240 31.606 5.14e-20 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00512 - - psat:127115199 418.698