Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00492 ATGGGGTTTACCACAATTTTAACTCTCACCTTTCTCTTGTTTATTGGAACTACTTTGGTGAATGGATCCACTCCAAAGCATTATATAATTTACATGGGAGATCATTCACACCCTAATACAGAATCTGTCATCAGAGCAAACCATGAGATACTAGCTTCAGTCACTGGAAGTGATGCAAAGGCAACAGCACTACACCATTATAGTAAAAGCTTTCGAGGCTTTTCCGCAATGATTACGTCGGATCAAGCTAATAAGCTTGCAGAATATGATTCAGTTGTGTCTGTTTTTGAGAGCAAAATGAGTAAGCTCCACACAACACATTCTTGGGATTTTCTTAGATTAGGCATAGTCTACAATAGCAACCACATAGCTATAGACTCTACATCCAATGTCATTGTTGGTGTCATTGACTCTGGAGTATGGCCGGAATCAGAAAGCTTTAATGACTACGGAATAGGTTCCGTGCCTGAGAAATTCAAGGGCGAGTGTGTTACCGGCGATAATTTTACGCTTGCCAATTGCAACAATAAAATCATTGGTGCACGGTTCTATTCAGAAGGTTTTGAAGCAGAAAACGGTCCTCTAGAAGGCGTTGTGGACAAGGTTTTCTTCAGATCAGCTAGAGACAGCGATGGACACGGAACACACACAGCTTCCACCATTGCAGGATCCATTGTTGCTAATGCTAGCTTATTCGGCATTGCCAAAGGAACCGCTAGAGGCGGTGCTCCAAGTGCAAGACTTGCTATCTACAAGGCCTGTTGGTTTGGATTTTGCAGTGATGCTGATGTTCTTTCTGCTATGGATGATGCCATTCATGATGGTGTTGACATACTTTCCCTCTCCCTTGGTCCTAATCCTCCGCAGCCAAATTACTTCGAGGACGCAGTCAGCGTCGGAGCATTCCATGCATTTCAAAAGGGAATTCTTGTTTCTGCTTCTGCTGGAAACTCGGTTTTTCCTCGAACGGCTTGCAATGTTGCTCCTTGGATCCTCACTGTCGCTGCTAGCACGTTAGACAGAGAATTCAGTTCAAATATCTACCTCGGCAACTCAAAAGTTTTGAAGGGTTTTTCTCTAAATCCAATAAGAATGGAGCATTTTCATGGTTTGATATATGGAAGTGCAGCTGCAGCTTCTGGAGTTCCAGCAACAAATGCAAGCTTCTGCAAGAACAATACTCTCGATCCTACCTTAATCAATGGAAAAATTGTTATCTGCACAATTGAAACTTTCACCGACAAAAGAGAAGAAAAATCGATAATTGTAAAGCAAGGTGGTGGTGTTGGAATGATACTTATTGACCATAATGCCAAAGAAGTTGGTTTTCAGTTTGTCATTCCAAGCACTATTATTGGTCAGGATGCTGTAGAAGAGCTTCAAGCATACATAAACACAGATATGAACCCCATTGCTAAAATCTATCCAACAATAACTGTGGTTGGTACTAAACCTGCTCCAGAAGTAGCAGCTTTCTCTTCCATGGGGCCAAATATAATAACACCTGATATTATCAAGCCTGATATCACAGGACCTGGACTGAATATTCTGGCAGCATGGTCTCCGGTGGCTACTGAAGCCACGGTTGAGCAACAATCTGTCGACTATAACATCATTTCAGGAACATCAATGTCTTGTCCACACATATCCGCGGTCGCGGCAATTATCAAATCTTACCACCCAACTTGGTCTCCTGCCGCTATAATGTCTGCAATAATGACAACAGCAACAGTAATTGATAACACAAACCACCTCATAGGAAGAGATCCAAATGGAACTCAAACAACTCCGTTCGACTACGGATCAGGACACGTTAATCCTCTTGCATCACTCAATCCTGGACTAGTATATGATTTCGATTCCCAAGATGCTCTCGATTTTCTTTGCAGCAATGGAGCTAGTCCATCACAGCTTAAAAACATCACTGGTGAACTTACTCAATGCCAGAAAACTCCTACACCTTCCTACAACTTCAATTACCCTTCAATTGGTGTATCAAATTTGAATGGAAGTTTATCTGTTTATCGGACCGTTACATACTATGGTCGGGAACCAGCAGTGTATGTTGCAAGTGTTGAAAATCCATCTGGTGTGAATGTTAAAGTTACACCAGTGGGATTGAAGTTCTCGAAAACGGGAGAGAAGATAACTTTTAGGATTGATATTGTCCCTTTCAAGAATAGTAATGGAAACTTTGTGTTTGGTGCCTTGACATGGAGGAATGGTAGACAAAATGTAAGGAGTCCTATTGGTGTTAATGTAGTATCTATATAG 2274 0.4169 MGFTTILTLTFLLFIGTTLVNGSTPKHYIIYMGDHSHPNTESVIRANHEILASVTGSDAKATALHHYSKSFRGFSAMITSDQANKLAEYDSVVSVFESKMSKLHTTHSWDFLRLGIVYNSNHIAIDSTSNVIVGVIDSGVWPESESFNDYGIGSVPEKFKGECVTGDNFTLANCNNKIIGARFYSEGFEAENGPLEGVVDKVFFRSARDSDGHGTHTASTIAGSIVANASLFGIAKGTARGGAPSARLAIYKACWFGFCSDADVLSAMDDAIHDGVDILSLSLGPNPPQPNYFEDAVSVGAFHAFQKGILVSASAGNSVFPRTACNVAPWILTVAASTLDREFSSNIYLGNSKVLKGFSLNPIRMEHFHGLIYGSAAAASGVPATNASFCKNNTLDPTLINGKIVICTIETFTDKREEKSIIVKQGGGVGMILIDHNAKEVGFQFVIPSTIIGQDAVEELQAYINTDMNPIAKIYPTITVVGTKPAPEVAAFSSMGPNIITPDIIKPDITGPGLNILAAWSPVATEATVEQQSVDYNIISGTSMSCPHISAVAAIIKSYHPTWSPAAIMSAIMTTATVIDNTNHLIGRDPNGTQTTPFDYGSGHVNPLASLNPGLVYDFDSQDALDFLCSNGASPSQLKNITGELTQCQKTPTPSYNFNYPSIGVSNLNGSLSVYRTVTYYGREPAVYVASVENPSGVNVKVTPVGLKFSKTGEKITFRIDIVPFKNSNGNFVFGALTWRNGRQNVRSPIGVNVVSI 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00492 757 Pfam Fibronectin type-III domain 657 752 IPR041469 -
Vifa6g00492 757 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
Vifa6g00492 757 Pfam Peptidase inhibitor I9 27 104 IPR010259 -
Vifa6g00492 757 CDD Peptidases_S8_3 102 577 IPR034197 -
Vifa6g00492 757 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 104 IPR037045 -
Vifa6g00492 757 Gene3D - 340 481 - -
Vifa6g00492 757 Gene3D Peptidase S8/S53 domain 130 623 IPR036852 GO:0004252|GO:0006508
Vifa6g00492 757 Gene3D - 628 755 - -
Vifa6g00492 757 ProSiteProfiles Serine proteases, subtilase domain profile. 108 611 - -
Vifa6g00492 757 FunFam Subtilisin-like protease SBT1.5 130 353 - -
Vifa6g00492 757 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Vifa6g00492 757 PRINTS Subtilisin serine protease family (S8) signature 209 222 IPR015500 -
Vifa6g00492 757 PRINTS Subtilisin serine protease family (S8) signature 128 147 IPR015500 -
Vifa6g00492 757 Pfam PA domain 387 460 IPR003137 -
Vifa6g00492 757 SUPERFAMILY Subtilisin-like 103 615 IPR036852 GO:0004252|GO:0006508
Vifa6g00492 757 CDD PA_subtilisin_like 346 474 - -
Vifa6g00492 757 Pfam Subtilase family 129 589 IPR000209 GO:0006508|GO:0008236
Vifa6g00492 757 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 750 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00492 Vifa-Chr6 190661747 190665433 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00492 28 754 Subtilisin-like Serine Gene Family AT2G04160 43.495 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00492 - - gmx:100792672 1261.13