Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00484 ATGAGTTCTCAAGATTCTCTTTCTCTTCAATCTACCTTCACTCTCCTCTTCTTCTCTTTCACCTTTCTATTCTCAATCTTTTCTTTTCTCGTCTATATCTCTAGAATTAAACCATGGTGTAATTGCAACACTTGCAAAGCTTACTTATCTATGACTTGGTCACAAAACTTCGTAAACCTCTGCGACTACTACACTCATCTTCTTCAAACCTCACCCACAGGTACAATCCATGTCCACGTCTTAGATAACATCATAACCGCAAATCCAGAAAATGTAGAATACATCCTCAAAACAAATTTCAACAACTACCCTAAAGGGAAACAGTTTTCCGCAATTCTCGGCGATCTTCTCGGCCGTGGTATCTTCAACGTTGATGGTGATTCGTGGAAGTTTCAACGCAAAATGGCATCTCTTGAACTCGGAAGCGTAGCTATTCGTTCTTACGCTATGGAACTTGTCACAGAAGAAATCAAAGCAAGGTTTATTCCTCTCGTAGCTTCAAAAACTGGTGAAAAGGATGATGGTTTTATGGACATGCAAGATATTCTTAGAAGATTTTCTTTCGACAATATTTGTAAATTCTCATTTGGTTTAGACCCGTGTTGTCTTGTTCCATCACTTCCACTTCCAGTTTCAAAGCTCGCTGACGCTTTTGATCTCTCATCAAAGCTTTCAGCTGAAAGAGCAATGAACGCGTCACCGTTAATATGGAAGATGAAGCGTTTCTTCAATGTTGGATCAGAGAAGAAGCTGAAAGAAGCGATTGAAGTGGTGAACGACATGGCGAAAGAGATGATAAAACAAAAACGAGAAATTGAAACTGGAGTTGACTCGCGAAAAGATCTTCTCTCACGTTTTATGGCTTCTTTGAATTCAAACGAAGACCAATATTTGAAAGATATTGTAGTCAGTTTTCTTTTGGCGGGTCGTGATACGGTTGCTTCTGCATTGACCGGGTTTTTTATGTTATTGTCTAATAACCCGGATGTTGAGAAAAAGATTCGGGTTGAGTTAGACCGGATAATGAACCCGGTTCAGGAAGTTGTTACTTTTGAACAGACGCGTGAAATGCATTATCTAAATGGAGCCATTCATGAGAGCATGAGGCTGTTTCCACCGGTTCAGTTCGATTCAAAGTTTGCTTTGGAGGATGACGTCTTACCTGATGGAACTTTTGTTAAAAAGGGAAGTCGGGTTACTTATCATCCATATGCAATGGGTCGGATGGAGAATATCTGGGGATCCGACTTTATGGAATTTAAACCGGAGAGATGGTTGAGAGAAGGTGTGTTTGTACCAAAATGCCCTTTTAAGTATCCAGTTTTTCAAGCAGGTGGGAGAGTTTGTTTGGGAAAGGAACTGGCTATTGTAGAGATGAAGGCTGTTGTTGCTGCTTTAGTAAAACGGTTTGATGTTCGGGTTGTTGGACCGAATCAGGAGCCACGGTTCGAACCGGGTCTAACTGCCACGTTTAGAGGTGGCTTGCCGGTTAAGTTTTATGAAAGAACAGAACATGAATACTAA 1524 0.4075 MSSQDSLSLQSTFTLLFFSFTFLFSIFSFLVYISRIKPWCNCNTCKAYLSMTWSQNFVNLCDYYTHLLQTSPTGTIHVHVLDNIITANPENVEYILKTNFNNYPKGKQFSAILGDLLGRGIFNVDGDSWKFQRKMASLELGSVAIRSYAMELVTEEIKARFIPLVASKTGEKDDGFMDMQDILRRFSFDNICKFSFGLDPCCLVPSLPLPVSKLADAFDLSSKLSAERAMNASPLIWKMKRFFNVGSEKKLKEAIEVVNDMAKEMIKQKREIETGVDSRKDLLSRFMASLNSNEDQYLKDIVVSFLLAGRDTVASALTGFFMLLSNNPDVEKKIRVELDRIMNPVQEVVTFEQTREMHYLNGAIHESMRLFPPVQFDSKFALEDDVLPDGTFVKKGSRVTYHPYAMGRMENIWGSDFMEFKPERWLREGVFVPKCPFKYPVFQAGGRVCLGKELAIVEMKAVVAALVKRFDVRVVGPNQEPRFEPGLTATFRGGLPVKFYERTEHEY 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00484 507 PANTHER CYTOCHROME P450 31 496 - -
Vifa6g00484 507 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00484 507 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00484 507 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00484 507 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00484 507 Coils Coil 251 271 - -
Vifa6g00484 507 CDD CYP86A 72 495 - -
Vifa6g00484 507 SUPERFAMILY Cytochrome P450 58 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00484 507 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00484 507 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00484 507 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00484 507 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00484 507 Gene3D Cytochrome P450 47 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00484 507 Pfam Cytochrome P450 72 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00484 Vifa-Chr6 186703914 186705437 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00484 30 503 Cytochrome P450 AT2G27690 59.708 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00484 K20624 - gmx:100813091 724.931