Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00451 ATGTTCCATTCTCACCGTCTCAAAGCTGTTGTCTACCTCAACCATCTTTCTTCAACTCCAAAATCTCACCACCTTCTTCACTCTCTCAATCCCTTCTCCACCACTTCAGATTCCTTCACCCTATCCTACTTCACCAACAACTGTGGCCTATCTCCACAAGACGCTCTCAAAGCCTCAAAACGACTCCGTCTCACTTTCACCACACCCGAAAAACCCAACTCCGTTATCGCCTTCTTCAAAACCCATGGTTTCTCCATTCCCCAAATCCAATCCATCATTCTCAAGAACCCCCAACTCATCCTCTCCAACCCCACCAAAACCATTCTCCCTAAGTTTCAATTTTTAGCCTCCAAAGGCGCTTCTCCCTCCGACATAGTCGCCGCCGTCACCAGAAGCTCTCGTTTCCTCCGTGTAAGCCTCGAGAAACATATTATCCCTGCTTTTCAGTTGGTGGCATTGGCAACAGCAGCAAAAGCAAAATTACTTCTTCGTGAGCTAAAAACCGTTAAAGCGGATTTAGCATTTGCTAAAGCGCGCTGTGCTCAACTTGAAGAAGAAAATAAATTACTCAGGGAACGAGAAGGAAGCGATAAGGGACTTATCCGTGATGATGATGATCTGATCTTGGTAATCTCATCTATTGGGTTGATATTTTTCATAGCATTGCGTTATCATCTCAAAAAGATTCGAGATCAAAAGATCATTCCGCGTTTAAGATTATCGCGTGCAGGTCACCCCCCAAAGCTTGAAAGATTCTCTCATTACGTATCTAGGCAAATGGGGTTCAAGGATAGGAGAATCGGTCCTGATATATGTAGATTGGCTTCTGAATACATAAGCAAATATGAAGGGTTTGAAGATGATATATATGCCTATTTTGAGAATGAACCAGATGCTGATTCACTTTATGTCAAGTTGGTGGAAGAGTTTGAGAGATGCATTCTTAGTTACTTTGGATTTCATTGGAACCATTGTGACATATTGATAAGTCAGGTTTTGAGCTCGGACATTTCTGAGCCAAAAAAGAAGCTAAAGAACATAGTTATGGCTGCTACTAGGGATCAAAGGTTCGAGAGAGTTGCCAAGAGTCTGAAGGTGGCTAGTGTTTTTAATACATTAGTGGAAGAGATGAAAGCGATGGGTATTGCAGAGGTGAAATATTCCGCTGCTTCTTTGGCTGCTCAAAGTCTATTGCTAAGGTGA 1203 0.4273 MFHSHRLKAVVYLNHLSSTPKSHHLLHSLNPFSTTSDSFTLSYFTNNCGLSPQDALKASKRLRLTFTTPEKPNSVIAFFKTHGFSIPQIQSIILKNPQLILSNPTKTILPKFQFLASKGASPSDIVAAVTRSSRFLRVSLEKHIIPAFQLVALATAAKAKLLLRELKTVKADLAFAKARCAQLEEENKLLREREGSDKGLIRDDDDLILVISSIGLIFFIALRYHLKKIRDQKIIPRLRLSRAGHPPKLERFSHYVSRQMGFKDRRIGPDICRLASEYISKYEGFEDDIYAYFENEPDADSLYVKLVEEFERCILSYFGFHWNHCDILISQVLSSDISEPKKKLKNIVMAATRDQRFERVAKSLKVASVFNTLVEEMKAMGIAEVKYSAASLAAQSLLLR 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00451 400 Gene3D Transcription termination factor 3, mitochondrial 47 202 IPR038538 -
Vifa6g00451 400 PANTHER UNCHARACTERIZED 208 387 IPR044802 -
Vifa6g00451 400 SMART mt_12 126 158 IPR003690 GO:0003690|GO:0006355
Vifa6g00451 400 SMART mt_12 90 121 IPR003690 GO:0003690|GO:0006355
Vifa6g00451 400 Pfam mTERF 77 152 IPR003690 GO:0003690|GO:0006355
Vifa6g00451 400 Coils Coil 159 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00451 Vifa-Chr6 175563440 175565766 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vifa6g00451 mTERF 4.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00451 - - gmx:100794775 277.33