Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00445 ATGGGTTGTTTAAGTCTCTCATCAACTATTTTCGTTCTTCTTTTTCTTCTTATGGTCCCTGTTAATGGAAAACCTCGAGTCCCTGCATTGTTCTTCTTTGGAGACTCTACTGTTGATGTTGGCAATAACAACTATCTACCTACTTTTGTTAAAGCAAATTATCTTCCTTATGGAAGAGACTTTGTGAATCACTATCCAACCGGAAGATTTTCCAATGGAAAAGTTATTAGTGACTTCGCATCTGAAATCTTTGGATTTACCTCTTATCAACCTGCTTACCTCAGTTTATACATCAAAGGAAAGAACATCTTGAATGGGGCTAACTTTGCCTCAGCTGGTTCTGGTTACCATGATTCTACTGCCAAATTATTCCATTCGCTTTCATTGAGCCAACAATTGGAACACTATAAGGAGTACCAGAAGGATTTAATGAAAATAGCAGGGAGAAGAGATGCATTGTCAATTATAAATGGTGCTTTATATATGGTTGGTTTTGGAAGTGGTGATATTTTATTGAATTATTACCTAAATCCATTGCTTCGCCTGGTTTATACTTCTGATCAATTCACAGACATTCTTGTGCAAAATTATGCCGATTTCATCCAGAATTTATATGCACAAGGAGCAAGGAAAATTGCTGTGAAAACATTAACTGCGATAGGTTGCTTGCCTGCAGCCATTACTGTGTTTGATTCTGGCTATAGCAACACATGTGTGGTGGAATTGAACAATGTTGCTCTTAGCTGTAATCAAAAGCTCAACACCACATCTGTGAACTTGAGAAAAATGCTTCCCGGTCTCAATTTGGCTCTCCTTGACGGCTATCAACCTCTCTATAACCTAGTCACAAAACCCTCTCAATATGGATTTACTGAAACAAGGAATGGGTGTTTTGGGACAAGCTTCCTAGAAAAAACTTCTACTTCATTTAATAATAAAAAGACCTTTATAAAATTATGTCCTAATGCATCAAAATATGTATTTTGGGATGCTCTTCATCTCTCAGAGACTGCAGTCAAGTTTGTGGCGTCTGAGATGTTTTCTAATGTCATCTCTCTTATACCGTAA 1068 0.3717 MGCLSLSSTIFVLLFLLMVPVNGKPRVPALFFFGDSTVDVGNNNYLPTFVKANYLPYGRDFVNHYPTGRFSNGKVISDFASEIFGFTSYQPAYLSLYIKGKNILNGANFASAGSGYHDSTAKLFHSLSLSQQLEHYKEYQKDLMKIAGRRDALSIINGALYMVGFGSGDILLNYYLNPLLRLVYTSDQFTDILVQNYADFIQNLYAQGARKIAVKTLTAIGCLPAAITVFDSGYSNTCVVELNNVALSCNQKLNTTSVNLRKMLPGLNLALLDGYQPLYNLVTKPSQYGFTETRNGCFGTSFLEKTSTSFNNKKTFIKLCPNASKYVFWDALHLSETAVKFVASEMFSNVISLIP 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00445 355 SUPERFAMILY SGNH hydrolase 30 347 - -
Vifa6g00445 355 PANTHER GDSL ESTERASE/LIPASE EXL3 14 345 - -
Vifa6g00445 355 Pfam GDSL-like Lipase/Acylhydrolase 30 345 IPR001087 GO:0016788
Vifa6g00445 355 CDD SGNH_plant_lipase_like 28 349 IPR035669 -
Vifa6g00445 355 Gene3D SGNH hydrolase 19 352 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00445 Vifa-Chr6 174679069 174680666 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00445 4 350 Pollen Coat Proteome AT1G75910 35.143 1.64e-58 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00445 - - tcc:18590425 400.593