Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00368 ATGGAACAACCTCAACAACAGCAACAACAAAATGATCAGGAAAATGGTGGAGGTGGCAGTAGCGGAAAAGGAAGTGGGTTCAGACAAAGTAGTACAAGGTGGACACCAACAACAGACCAGATAAGAATATTGAAGGATCTTTACTACAACAATGGAATAAGATCACCAAGTGCTGAACAGATTCATAGGATCTCTGCTAGGTTAAGACAGTACGGTAAGATTGAAGGAAAAAATGTGTTTTATTGGTTTCAAAATCATAAGGCTAGAGAAAGACAGAAGAAAAGATTCACTTCTGATGTTAATGTTCTTCCCATCATTCAAAGAGCACCTAACAATATTTCTATTGCCTCTGCTAATTGGAAACCTGATCATGAACAACAACAACAATCCATTCTTCACACCAACCATTCCAATTACAACATTTCAAAAGAAACTAAGCTAACATTGCGCGAACCGCATCATGCACATAATAAAGTATCAACCAAAACAGAATGCAAGTAA 501 0.3733 MEQPQQQQQQNDQENGGGGSSGKGSGFRQSSTRWTPTTDQIRILKDLYYNNGIRSPSAEQIHRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSDVNVLPIIQRAPNNISIASANWKPDHEQQQQSILHTNHSNYNISKETKLTLREPHHAHNKVSTKTECK 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00368 166 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 9 152 IPR044555 GO:0003700|GO:0099402
Vifa6g00368 166 CDD homeodomain 32 94 IPR001356 GO:0003677
Vifa6g00368 166 MobiDBLite consensus disorder prediction 1 36 - -
Vifa6g00368 166 SUPERFAMILY Homeodomain-like 27 98 IPR009057 -
Vifa6g00368 166 ProSiteProfiles 'Homeobox' domain profile. 27 93 IPR001356 GO:0003677
Vifa6g00368 166 Pfam Homeodomain 31 92 IPR001356 GO:0003677
Vifa6g00368 166 Gene3D - 25 93 - -
Vifa6g00368 166 SMART HOX_1 29 97 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00368 Vifa-Chr6 151221852 151222352 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00368 28 117 Wox Gene Family AT2G17950 68.889 4.32e-40 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Vifa6g00368 Homeodomain 2.1e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00368 - - zju:107424391 171.4