Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00347 ATGAGCATGAAGATAGAAGAAGACAGTGTGCTGAATCAAAAGCAAGGGATAGTCACTATTTTGAACTGTAACACTGACACTAATTTCACACCACCTTCTCTTAGAAGAACTCTCTCAGCAGACATGTCTTCCAAGAAATGGCTTTCTCATAAAGGTTCTTCCAACACCATCAAGAAGATTTCATCATCTGAGAATCTGTTTGGACAAGATGATGGTGAGTTCAAAGAAGCTAAGTTGGGTGATGATGAAGATGAAGCTGAGAGAGAGAGGCTTCAGATTTGGAGTTCAATCCAGAGAAACAAGAAGGAAGAGCAAGAGAAAGGTGGTTCGTTTGATACTTGGAGTTCACTCATGTCTTTGAAGACTAATGATGAAATCTCTAAGTCACTTCCACCTTACATTCATCCTCTCGCTAAGAGGACGAAAAGCTCTTTGTCTAGGAAGAGCCTTGAGATTTGCACTGAGAGTCTCGGATCCGAGACTGGTTCTGATGGTTTAGTGTTCTCTTACCCTCCATCTGAGAGTCTCGGATCTGAGACTGAGTCTGATGAAAAGTTGTCATCTTATCCTCTGTCAGAGTTGAGAGAGGATATACTAGAACAACAACCTCAGACCCAGAAAGAACAAGAACATGAAGTTAAAGAAAAAATCAAAGAGGAAGCGTTGGAAGTGGAAAGGTTCAATTATGGTGGTGTTACTTGTACAAATAAAAAGTCACCACCGCGATCCTTTCCTCCACCGCTTCCTTCACTCTCTCGCCAAGACGGTCCTTCTCTTCAGATGAGGCCACACCGCGACAACGGAAGGTTGGTTTTAGAAGCTGTGTCTCTTCCTTCATTGAACAACTTCTGTGTTCAACGCCAAGATGGTAGACTCGTCCTCACTTTTGCAAATCAAGATGAAGAAAATGGCGAGAATGATGAGGTAGGTGAGTTGGAGGAAGAGTTTGAAGGATTCGAAGAAGATGAAGTTGAAGATGAGGAATATGAGAGTGTGATAGGAAAAGGATCAATAATGTCTTTTGAGAAAACTACTATAAAAAGTAGTGTTCATTGGATTGGATCAAACCATCACACCAAGGTGAATAAGACAATTGGGCTATTGAATAGGAATCCAAAGTGGTCAAAGAAGTTCAACAATGAAGTGGATAACAAAGATGTTCAAGTAGTGGAAGCTAGTCAAATGGTAAAATCACTTCCACCAAGGCCAAGAGTTGCAAGATTGATTCCATCACCACCCAATGCAGCAACTGCTTCATTCAATTTTAATTCTTATCAACATTACTGGAGGACCACAAATCCAACATCAACCAAAGGTGGTAATTATCCACTTGACCGTTACCAAGAGAAAAACAACACCAACGACAACAACAACGACAACAACAAGTGTAACAAGATTGTCGTGTCTGCAAAAGGTGAGATGAAGAACATGAACATGAACCGTGTTTCAAATGAGAAGCAACAGCTTTTGGTTCTTAAAGGAAAGAATGGTGATTATTTGGTTCATAATTTGAAGAATTGCAAGGATTCAAGAAGGTCTTTTCTCTTTTGGGAACCTTATTGCATTGCTACCTCATGA 1578 0.4049 MSMKIEEDSVLNQKQGIVTILNCNTDTNFTPPSLRRTLSADMSSKKWLSHKGSSNTIKKISSSENLFGQDDGEFKEAKLGDDEDEAERERLQIWSSIQRNKKEEQEKGGSFDTWSSLMSLKTNDEISKSLPPYIHPLAKRTKSSLSRKSLEICTESLGSETGSDGLVFSYPPSESLGSETESDEKLSSYPLSELREDILEQQPQTQKEQEHEVKEKIKEEALEVERFNYGGVTCTNKKSPPRSFPPPLPSLSRQDGPSLQMRPHRDNGRLVLEAVSLPSLNNFCVQRQDGRLVLTFANQDEENGENDEVGELEEEFEGFEEDEVEDEEYESVIGKGSIMSFEKTTIKSSVHWIGSNHHTKVNKTIGLLNRNPKWSKKFNNEVDNKDVQVVEASQMVKSLPPRPRVARLIPSPPNAATASFNFNSYQHYWRTTNPTSTKGGNYPLDRYQEKNNTNDNNNDNNKCNKIVVSAKGEMKNMNMNRVSNEKQQLLVLKGKNGDYLVHNLKNCKDSRRSFLFWEPYCIATS 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00347 525 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 32 524 IPR021410 -
Vifa6g00347 525 Pfam Fantastic Four meristem regulator 243 296 IPR046431 -
Vifa6g00347 525 MobiDBLite consensus disorder prediction 161 188 - -
Vifa6g00347 525 MobiDBLite consensus disorder prediction 161 177 - -
Vifa6g00347 525 MobiDBLite consensus disorder prediction 232 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00347 Vifa-Chr6 141831605 141833182 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00347 - - psat:127101885 832.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g02171 1 347675726 347676937 Vifa6g00347 6 141831605 141833182 PCT