Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00259 ATGTCGAAAACATTATTAGACGAATGTCGTGGCGTACTTCATGTCTATAGCGACGGTTCCATAGTCCGCGCTGCAAACCCAGCTTTTAACGTTCCTATTCACGACGACGGCACCGTTTTATGGAAAGACGTCGTTTTCGACTCAGCTCATGATCTTAAGCTACGCCTCTACAAGCCAGCTAATTCAACAAAAGGCTCCAACCTTCCAGTTTTTTACTATATCCACGGTGGTGGCTTCTGCATCGGCTCACGCACATGGCCAAACTGTCAGAACTATTGCTTCAAACTCGCATCTCAGCTGCAAGCCATAGTGGTTGCTCCTGATTATAGGCTCGCCCCGGAGAATCGGCTTCCATGCGCGTTTGAAGATGGTTTCATGGCTGTTAAGTGGCTTCAAGAGCAAGCTTTGTGTAGTAAACCGGACTCTTGGTTGAACGACGTGGCTGATTTTAGCCGGGTTTTTATCTCTGGTGACTCGGCCGGTGGTACTATGGCTCATGATTTAGCCGTTCGGCTTGGGTTTGGTTCGACCGAAATGGAACCGGTTCGGGTGAGGGGTTATGTTCTGCTGGCACCGTTTTTTGGTGGAACGGTTCGAACCAAGTCGGAAGCTGAAGGGCCTAAAGATGCTTTTCTGAACTTAGAACTTATTGACAGGTTTTGGAGGCTTTCAGTACCTACTGGAGAGAACATAGATCATCCATTTGTGAATCCTTTTGGACCAGATAGTAAGAGTTTTGAGGAAATTGATCTTGATCCTATTCTGGTAGTTGTTGGAGAGAATGATTTGCTTAAAGATAGAGTTGAGGAATATGCAAATAGGCTTAAGAGTTGGGGTAAAAATGTTGAGTATGTAGAATTTGAAGGACAACAACATGGGTTTTTTACTATTGATCCAAATTCTGAACCATCAAAAGAGTTGATGTTGGTCATCAAACAATTCATAGACAAGTATTAA 957 0.4431 MSKTLLDECRGVLHVYSDGSIVRAANPAFNVPIHDDGTVLWKDVVFDSAHDLKLRLYKPANSTKGSNLPVFYYIHGGGFCIGSRTWPNCQNYCFKLASQLQAIVVAPDYRLAPENRLPCAFEDGFMAVKWLQEQALCSKPDSWLNDVADFSRVFISGDSAGGTMAHDLAVRLGFGSTEMEPVRVRGYVLLAPFFGGTVRTKSEAEGPKDAFLNLELIDRFWRLSVPTGENIDHPFVNPFGPDSKSFEEIDLDPILVVVGENDLLKDRVEEYANRLKSWGKNVEYVEFEGQQHGFFTIDPNSEPSKELMLVIKQFIDKY 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00259 318 Coils Coil 261 281 - -
Vifa6g00259 318 Gene3D alpha/beta hydrolase 13 316 IPR029058 -
Vifa6g00259 318 PANTHER ARYLACETAMIDE DEACETYLASE 11 299 - -
Vifa6g00259 318 Pfam alpha/beta hydrolase fold 72 295 IPR013094 GO:0016787
Vifa6g00259 318 SUPERFAMILY alpha/beta-Hydrolases 11 318 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00259 Vifa-Chr6 112094159 112095115 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00259 5 315 Carbohydrate Esterase AT5G16080 34.161 6.23e-56 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00259 - - aprc:113858789 524.242