Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00257 ATGTCTGAGTTTGACACAAACATCCCAACAACTTTTGATCCCTTTGCTGAGGCAAATGCTGAGGACTCTGGTGCCGGTGCCGGGACAAAAGAATATGTTCATGTCCGTGTACAACAGCGTAACGGAAGGAAAAGCTTAACAACTGTTCAAGGGTTAAAGAAAGAGTTCAGCTATAGCAAGATACTCAAGGACTTGAAGAAAGAATTTTGCTGTAATGGTACTGTTGTCGAGGACCCTGAGTTGGGCCAGGTCATACAACTTCAGGGAGATCAAAGGAAGAATGTTTCTACTTTCCTTGTGCAGGCTGGCATTGTAAAGAAGGAGAATATCAAGCTTCATGGTTTTTAA 348 0.4282 MSEFDTNIPTTFDPFAEANAEDSGAGAGTKEYVHVRVQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVEDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKLHGF 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00257 115 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 8 115 - -
Vifa6g00257 115 NCBIfam translation initiation factor SUI1 7 115 IPR005874 GO:0003743
Vifa6g00257 115 FunFam Eukaryotic translation initiation factor SUI1 2 115 - -
Vifa6g00257 115 SUPERFAMILY eIF1-like 7 115 IPR036877 GO:0003743|GO:0006413
Vifa6g00257 115 ProSiteProfiles Translation initiation factor SUI1 family profile. 33 103 IPR001950 GO:0003743|GO:0006413
Vifa6g00257 115 Gene3D - 2 115 - -
Vifa6g00257 115 Pfam Translation initiation factor SUI1 30 104 IPR001950 GO:0003743|GO:0006413
Vifa6g00257 115 CDD eIF1_SUI1 31 114 IPR005874 GO:0003743
Vifa6g00257 115 PIRSF Transl_init_SUI1_Euk 1 115 IPR005874 GO:0003743
Vifa6g00257 115 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00257 Vifa-Chr6 110510245 110511182 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00257 1 115 Eukaryotic Initiation Factors Gene Family AT4G27130 86.087 1.32e-72 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00257 K03113 - gmx:100784390 218.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g00257 6 110510245 110511182 Vifa6g00257 6 110510245 110511182 ECH