Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00245 ATGGGAAGCCAAAGTTACTTTATGGTCTTGATTATATGTGTTGTAGCAATAATTGGATCAAGTGATGCTGAATTGCAGTTAGGTTACTATGGTAAAAGCTGCCCAAAAGCTGAACAGATAGTTTTGAAATATGTTCATCAACATATTCCTAATGCACCATCACTAGCAGCTGCACTCATAAGACTACATTTTCATGACTGCTTTGTTAGGGGATGTGATGCGTCCGTGCTTGTGAACTCAACTCAAACCAATCAAGCTGAAAAAGTTGCTATTCCGAATCTTACACTTCGAGGCTTTGATTTCATTGACACTATAAAGAGTCTTATTGAAGCTGAATGTCCCGGCGTTGTTTCTTGTGCTGATATATTGTCTTTGTCCGCTAGAGACTCGGTTCATGCCATTGGTGGACCTTATTGGAATGTTCCAACAGGTCGAAGGGACGGAACCATCTCTAAATCAGCAGATGTTTTTATCAGCCTTCCTGCTCCATTTCACAACCTCACCACTCTTCTAACACTCTTTGGCAATGTTGGACTTGATGCCAATGACTTAGTCTTGCTTTCTGGTGCTCATACAATTGGTGTTTCTCATTGCCCAGCGATTTCAAACAGACTATATAATTTTACGGGAAAAGGTGATCAAGACCCGGATCTAGACAGTGAATATGCTACAAATTTGAAAAAATTTAAGTGCAAGAATATCAATGATCAAACCACACTTATTGAAATGGACCCTGGAAGTCGCAATACATTTGATCTAGGTTATTTCAAGCAAGTAGTTAAGAGAAGGGGTTTGTTTCAGTCAGATGCTGCATTGCTTAAAAGCTCTACAACAAGATCAATTGTTGCACAACATCTTCAATCAAATGAAAAATTCTTTACTGAATTTGCTAAATCTATGGAGAAAATGGGCCGAATTAGTGTTAAGGTTGGGACTGAAGGAGAAATTAGGAAGCATTGTGCATTTATAAATTAA 975 0.3846 MGSQSYFMVLIICVVAIIGSSDAELQLGYYGKSCPKAEQIVLKYVHQHIPNAPSLAAALIRLHFHDCFVRGCDASVLVNSTQTNQAEKVAIPNLTLRGFDFIDTIKSLIEAECPGVVSCADILSLSARDSVHAIGGPYWNVPTGRRDGTISKSADVFISLPAPFHNLTTLLTLFGNVGLDANDLVLLSGAHTIGVSHCPAISNRLYNFTGKGDQDPDLDSEYATNLKKFKCKNINDQTTLIEMDPGSRNTFDLGYFKQVVKRRGLFQSDAALLKSSTTRSIVAQHLQSNEKFFTEFAKSMEKMGRISVKVGTEGEIRKHCAFIN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00245 324 SUPERFAMILY Heme-dependent peroxidases 25 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa6g00245 324 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa6g00245 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa6g00245 324 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa6g00245 324 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa6g00245 324 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa6g00245 324 PANTHER PEROXIDASE 25-RELATED 12 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g00245 324 CDD secretory_peroxidase 24 323 IPR033905 GO:0004601|GO:0042744
Vifa6g00245 324 FunFam Peroxidase 161 303 - -
Vifa6g00245 324 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Vifa6g00245 324 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa6g00245 324 Pfam Peroxidase 45 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa6g00245 324 FunFam Peroxidase 28 166 - -
Vifa6g00245 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Vifa6g00245 324 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g00245 324 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g00245 324 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g00245 324 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g00245 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g00245 324 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g00245 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g00245 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g00245 324 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g00245 324 Gene3D Peroxidase, domain 2 161 303 - -
Vifa6g00245 324 Gene3D - 28 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00245 Vifa-Chr6 103522951 103524264 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00245 8 324 Peroxidase AT4G11290 62.382 3.04e-153 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00245 K00430 - gmx:100785662 535.798