Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00225 ATGGGCGATGGAGGCGTAGCGTGTATGCCTTTGCAGCAGCAACAACAGCGTGTTATTGAGAAGTTGTCGAATGCGACGGCGGCGGAGGAAACGGTTTGTGGAGGGAAGACTGAGAATGGTGTCAGTTCTGAGTTGGTTAAAGCTCCTGAGAAGAAGAAGGTGATAAAAGTGAAAAAGGTGAAGAAGATTGTGAAAAAAGTTAAGAAGAAAGTTGTGCCGGTGAAGAAGAAGGAGGGTGTGAATGTGAAAAAAGAGTTGGCGTTAGATATAGTGAGCAGCAATGGTGTCGACAGTGGCGATATATGCGGGCAGAAGGAAGAAGTTGAAGAGGGTGAATTGGGGACTTTGAAGTGGCCCAGGAGTGAATTGGAGAATGGAGAGTTTGTGCCTGAGAAGCTGCTGCCGTCGTCACCACCACCACCACCACCACAGAGTAATGAAATTGAGAATGGGGATGTTGTCACTGAGAGGTGGAAAAAAGTGCAGGTGGAGAAGGGTGAGGTTGACATTTGGAGAAAAAAGGAGATAGTTTCTGACAAGGGCTGGAAAGGTGAAAATGAGAAAGGGGCATATGGGTCATGGAGAGGTGGTATAAGCAGTGACGTTGAGAAGGGAGAATTCATTCCGGATAGGTGGCATAAGGGAGACACAGGTCAGGATGACTATTATGGGTACGGTAGAATCAACAGGTATGAGTCATGTCGGGACAAAGGGTGGAAAACCGAACGTGACTGGGAATGTACATCATCTTCTGGGAGGTATGCAGGTAATGATTTTTTCAGGAAGAAGGAATTTAATAGAAGTGGGAGTCAGCAGGTTAAAAGTGCATCCAGGTGGGAAGGTGGACCAGAGAGAAATATAAGGATCAGTTCAAAAGCTGCGGATGAAGAGAAAAATGAATACAATGGTAGGATACATGCACGGGAATATTCTTCCGGAAGTCGTTTGAAGAGGCATGGCAATGATTCAGACGGCTGGGAGCGGAAGCAGTATGGAGATTATGCTGGTTTCAAAAGTAGAAGGCTATGTGATGATGGCTCACACCATGTCTATTCAGACCACCATGTTTATTCAGAGAATCATTCTCGCCATTCTGTGGAGAGATCTTACAGAAATAGTTCTTCAAAGTTGTCTGCCGATAAGTATTCTTCTAGGCATCACGAATCTTCTTTGCCCACCAGATTAGCTTATGATAAACATGGATGCAGTCCTCGTCATTCTGAACGATCCTCACATGATCGAGCTAGATATTATGATAATAGAGATCACACTCCTGCTCGTCGGTCACCCTATGGCCGTGATAGATCTCCATATGGCCGTGACAGATCTCCATATAGCTGTGACAGATCTCCATATAGCCGTGACAGATCTCCATATAGCCGTGACAGATCTCCATATAGCCGTGAGAGATCTCCATATAACCGTGAGAGATCTCCATATAACCGTGAGAAATCTCCATATAACCGTGAGAAATCTCTGCATGGTCGTGAAAGATCCCCATGTGATAGGAATTGGGACAGAAGTCGTAACCGTGACCATAAATTAAGAAGTCCCATTCACGCTGAGCGGTCCCCACAAAATCGAGGTCGGCATCATGGCTACAGGGACCGAACTCCAAACTTGATAGAGCAATTCCCACTTGATCGAACTAGACAAAATAATGATCGAGAAACAAGTAATAAAACCTTATCAACTGAAAAACATAATTCACAATATAGCTGTAAGAATCCTGAAAACAAAAATATTCAAAAGGAGCCTACTCTTTCAGGTATAGAATTGCAAGGGGAAAGAAGTGTTCATGATGCCAATGGGCCTGTTGTGAAGGGTGTCTGCAATGAACCCGAAAAGGAACAAGAGTCCTGCAGGCCAGCTACAAACTGCCAAGATTCTCCTTGCTTGCAGCTACCTACTGAGGAGCTGCCTTCTATGGTAGAAGATATGGAAGAAGATATGGACATATGTGATACTCCTCCACATGTTCCTGTGTTTGCTGATTCATCATCAGGAAAATGGTTTTACCTTGATTATTGTGGTTTGGAACATGGTCCTTCTAAATTATCTGACATCAAGGTTCTTGTTGACGAGGGTCTACTAATGTCGGATCATTTTATTAAGCACATAGACAGTGACAGATGGTTAACTGTTGAGAATGCAGTATCACCATTGGCAGCTAAGAGTTTTCCATTGATTGTGTCAGACTCCATAACCCAGCTTGTAAATCCACCAGAAGCTCCTGGTAATCTTTTGTCAGACACTGGAGATATTCTTCAATCTGGACCCAAGAATGATCAGGAAAGGCAAGCCCCTTCCCTACAGTCAATTTTATACCCTGATGACAATATGCTTGCACCTGAACCGTTGGATGACCTCCATTTTGATGAAAGGGTTGGTGTTCTGTTAGAGGGTTATGATGTCATTCCTGGAAGGGAGCTTGAGGCAATAACAGAAGCACTGCAAATGAATTTTGAATATGCAGAGTGGGACGATTTGGGAGGCTTCAAAGGTTTTCCTGAGCCTGATACTTGCCAGAGCATGGACCATGATTCAAAGATTGATTTTGCATCAAGTGAGCAAGACTCCGACAAGGATAATGGCTTTACCCTTGGTGTTCCTGATGACTGGTTTTCTGCTCGCTGGTCATGCAAAGGTGGTGACTGGAAGAGGAATGAGGAATCCCAAGATAGATATTCTAAGAAGAAACTGGTCCTAAATGATGGGTTTCCTCTATCTCAAATGTCTAACTATGGATGTGAAGATCCTCGGTGGTCTCGGAAAGAAGACTTGTATTATCCATCTCACAGTAGGAAGCTTGACATTCCTCTTTGGGCTTTTTGTACCGATGAGTTGGTTGATTGCAGTGGTACTGTGAGTAGACCAGTTCAAAGCAAGTTTGTTTCTGTTAGAGGAGTAAAAGGAAATGTTCACTCAGTGGTCAGGATAAATTCATGCGTGGTCAAGGACCAGGGATCATTGGTCTCTGAGTCACACCACAAGACCCAAGGCAAGGATAGATATCATTCAAGGTCAGCCCGGCCTTTATCATCAACCAGGGATAGCAAGAGATCATCATCCGAAGAAGATTCACAGTCAAAAACTGTTATTGATCAAGGTTCTCAAGGCTATTGCAAGAGTGTAGAATCCATTAATATTTCTCAAGACCATCTCTGTGCCGTCCATGACTTGCAGCTGCATTTGGGCGACTGGTATTATCTTGATGGTTCGGGGCGCGAAAGAGGGCCGTCGACGTTTTCAGATCTACAGTCTTTAGTAGACCAAGGAATTATAAAGAAGTATTGCAGTGTGTTCCGGAAATGTGATAAACTCTGGGTTCCTGTTACATCTTCCACAGAAACTTTGGGTGTCCATCGCAAGAGCCACCAAGAAAGCAGTTCAGTGTCTGGTGAATTTTCAGAACATCGATCAGTGCAATCTCAAGGTGTTTCATTTGGTGAACCCCATTCAAAGTCAAATATGTTTAACAGCATATACCCCCAGTTTGTTGGTTATACTCGCGGGAAACTACATGAGTTAGTAATTAAATCATATAAGAGCCGGGAATTTGCTGCAGTAATAAATGAGGTTTTAGATCCTTGGATCAATGCAAGACAGCCAAAGAAGGAAATTGAGAAACAAATATATTGGAAATCAGAAGGTGATGCACATGCTTCCAAAAGAATCCGGGTGCTGGTTGACGATAGTGAAGAAGAGAGTAATTTTGAAGATGACAGCTTTATTATTGAGAACGATAAATCCACTCTTGAGGCTCTGTCTGGTGATGTTACTTTCTCTGCCGAAGAAAGTGGCGTTACTATTTCCAAGGAGGAGGAAAGATGGGGCTTATTGGATGGCCGAATGTTGGCACGGGTCTTCCACTTCTTGAGGTCTGATTTGAAGTCTCTTGTCTTTGCATCCATGACATGCAAGCATTGGAAAGCGTCTGTAAAGTTTTACAAAGAAGTCTCAAGAAATGTCAACTTGTCATCCCTTGGTCAATTTTGCACTGATTCCATACTTTGGAACATCGTGAATGCCTATGAGAAAGACAAGATCAAATCTATGATTCTAATGGGTTGCACCAATATTACTGCTGACACACTAGAGAAAGTGTTTCTCTTATTTCCTGGTTTATCTACTGTAGATATCAGAGGGTGCAATCAGTTTGAGGAGCTCACTCCTAAATTTACCAATGTGAAATGGATCAAGAGCCGAAATTCACGCATAACTAAAATTGCAGACGAGCAACATAAAATCAGAAGCCTCAAACAGATTACCGATCAATCCTCGTCCGTTTCTAAGGCCAGTAGTTTTGGTATTAGGGATAATTTTGGTGAGCTGAAGGTTTATTTTGATAGTGTGGACAAGAGAGACACGGTGAAGCAATTATTCCGTCAAAATTTATACAAGCGTTCAAAATTATATGATGCAAGAAAGTCCTCTTCTATTCTCTCTAGAGATGCTCGAACAAGAAGATGGTCAATTAAGAAGTCTGAAAGTGGTTACAAAAAGATGGAGGAATTTCTTGCTTCAAGACTCAAGGAAATTATGAAGGCAAATGCTTGTGACTATTTTGTGCCCAAGGTTGCAGAAATTGAGGCTAAAATAAAAAGAGGTTATTACAGTGGACATGGGTTGAGCTCTGTGAAAGAGGACATAAGCAGAATGTGCCGAGATGCAATGAAGGCAAAGAATCGTGGTGATGCTAATGATATGAATCATGTTATCTCATTATTTATTCAGCTTGCAACACGGTTGGAGGAAAGTTCTAAATATATGAATGATAGAGATGCGCAATTGAAGTTATGGGGAAATGACTTACCGCTGGCATTCTGTTCTACTTCCTCTAAGTACAAGAAGAATAGATTAGTGACTGAGAGAAAGTATAGGAGTGATGGAATACCTGGTGGTTTGGATAATGGAGAGTATGCTTCTGATAGAGAAATCAGAAGGCGTTTATCAAAATTGAATAAGAAATCTATCGACTCAGAGAGTGAGACATCTGATGACCTTGATAGGTCTTCTGAAGATGGCATTAGTGACGGTGATACTTCAACCTCCAATACTGATAGTGACCAAGAAGCTCATTTAGAGAGACGAACCAGAGAATCAAAAGGAAATGGATACTTCACACCTAGTAATGGGTTGGATTTCATTACAGATGAGCGTGAATGGGGAGCTCGAATGACGAAAGCAAGTTTGGTTCCTCCTGTTACTCGGAAATATGATGTCATTGATCAATATGTCATTGTAGCTGATGAGGATGATGTGCAAAGGAAGATGCGGGTTTCATTACCAGATGACTATGCAGAGAAGTTGACTGCGCAAAAGAATGGCACTGAGGAGTCTGATATGGAACTCCCTGAAGTCAAGGATTACAAACCTAGGAAAAGGCTTGAAAATGAGGTTATTGAGCAAGAGGTTTATGGAATTGATCCCTATACACACAATCTTTTACTTGATTCTATGCCTGCGGAGTTAGATTGGTCTCTTCAAGAGAAGCATGTGTTTATAGAAGAGACACTCCTTCGGACATTGAATATGCAAGTTAGGCATTTTACCGGAACTGGAAGCACTCCAATGAGCTACCCTTTGCAGCCTGTTATCCAAGAGATTGAAAGGTGTGCAGAGGAGCACCGTGACACAAGAATGGTCAGTATGTGCCAAGGTATCCTAAAAGCCATGGACAGACGTCCTGATGATAAATATGTAGCTTATAGAAAGGGACTTGGTGTTGTTTGCAATAAGGAAGAGGGCTTTGGCGAAGATGATTTTGTCGTGGAGTTTCTTGGAGAGGTGTATCCTGTATGGAAGTGGTTTGAGAAACAAGATGGGATACGATCTCTGCAAAAAAATAGCAAAGATCCAGCACCAGAATTTTATAACATATACCTCGAGAGGCCAAAGGGTGATGCTGATGGTTATGACTTGGTTGTTGTTGATGCCATGCATAAGGCTAACTATGCCAGTCGAATATGTCATTCATGCCGACCTAATTGTGAAGCAAAAGTTACTGCTGTTGGCGGTCATTATCAAATCGGTATATATAGTGTTCGTAAAATTCAACATGGCGAGGAGATCACTTTTGATTACAACTCTGTTACAGAGAGCAAGGAGGAATATGAAGCATCAGTGTGTTTATGTGGAAGCCAAGTTTGCCGTGGAAGCTATCTAAATCTGACTGGTGAAGGGGCTTTCCAAAAGGTACTGAAAGAGTGGCATGGAATTCTTGACTGTCATTATTTGATGCTAGAAGCCTGTGAATTAAACTCTGTTTCTGAAGAGGACTATAATGACTTGGGAAGAGCTGGTTTAGGCAATTGTTTGCTTGGAGGCTTGCCAGATTGGCTAGTTGCTTATGCGGCTCGCCTTGTGAGATTTATTAATTTTGAAAGAACGAAACTTCCTGAGGCAATTCTAAAGCATAATTTGGAAGAAAAAAGAAAATATTTTTCAGATATATGTCTTGAAGTTGAGAGGAGTGACGCAGAGGTTCAGGCTGAGGGTGTATACAACCAGAGGCTTCAGAATCTTGCTGTCACACTTGATAAGGTAAGGTATGTTATGAGATGTGTTTTTGGTGATCCAATGAAAGCTCCACCTCCTATTGAGAAGCTCAGTCCTGAAGAAGTTGTTCCTCTCCTCTGGAAAGGAGAGGATTCATTCGTTGAGGAGCTTCTTCAATGCCTGACTCCTCACGTGGAAGAGTCTACCTTGAATGATCTCAAGTCCAAAACTCGTGCTCGCGATCCTCTGAATTCTAAAGATATTCCGAAAGCTATTCAGAAATCTCTGTTGTGGTTGAGAGACGAGGTTCGAAATCTTCCTTGTACATACAAATGTCGGCATGATGCTGCTGCTGACTTAATTCATATTTATGCTTATACCAAGTACTTCTTTAAAGTAGTGGATTATAAAACTACTACTTCACCACCTGTCTATATTAGTCCACTTGACTTAGGTCCTAAGTATGCTGACAAGTTGGGAGCAGGATTTCAGGAGTATCGGAAGATATATGGTCAAAATTATTGTTTAGGGCAACTGATATTTTGGCATAATCAGAGTGATGGGGAGCCTGATTGTACTCTGGCTAGAGCTAGCAAAGGCAGCTTGTCATTGCCAGACATCAGTTCCTTTTATGCTAAGGCTCATAAGCCTTCACGGCAACGTGTTTATGGTCCAAAGACTGTCAGATCCATGTTGGCAAGAATGGAGAAGCATCCCCAGAGACCTTGGCCCAAAGACCAGATCTGGTCATTCAAAAATAGTCCTAAATTTTTTGGTAGCCCAATGCTAGACGCTGTAATTAACAACACTCCACTGGATAGAGAGATGGTTCACTGGTTGAAGCACAGACCTGCAATATTCCAGGCCATGTGGGACCAGTAA 7383 0.4231 MGDGGVACMPLQQQQQRVIEKLSNATAAEETVCGGKTENGVSSELVKAPEKKKVIKVKKVKKIVKKVKKKVVPVKKKEGVNVKKELALDIVSSNGVDSGDICGQKEEVEEGELGTLKWPRSELENGEFVPEKLLPSSPPPPPPQSNEIENGDVVTERWKKVQVEKGEVDIWRKKEIVSDKGWKGENEKGAYGSWRGGISSDVEKGEFIPDRWHKGDTGQDDYYGYGRINRYESCRDKGWKTERDWECTSSSGRYAGNDFFRKKEFNRSGSQQVKSASRWEGGPERNIRISSKAADEEKNEYNGRIHAREYSSGSRLKRHGNDSDGWERKQYGDYAGFKSRRLCDDGSHHVYSDHHVYSENHSRHSVERSYRNSSSKLSADKYSSRHHESSLPTRLAYDKHGCSPRHSERSSHDRARYYDNRDHTPARRSPYGRDRSPYGRDRSPYSCDRSPYSRDRSPYSRDRSPYSRERSPYNRERSPYNREKSPYNREKSLHGRERSPCDRNWDRSRNRDHKLRSPIHAERSPQNRGRHHGYRDRTPNLIEQFPLDRTRQNNDRETSNKTLSTEKHNSQYSCKNPENKNIQKEPTLSGIELQGERSVHDANGPVVKGVCNEPEKEQESCRPATNCQDSPCLQLPTEELPSMVEDMEEDMDICDTPPHVPVFADSSSGKWFYLDYCGLEHGPSKLSDIKVLVDEGLLMSDHFIKHIDSDRWLTVENAVSPLAAKSFPLIVSDSITQLVNPPEAPGNLLSDTGDILQSGPKNDQERQAPSLQSILYPDDNMLAPEPLDDLHFDERVGVLLEGYDVIPGRELEAITEALQMNFEYAEWDDLGGFKGFPEPDTCQSMDHDSKIDFASSEQDSDKDNGFTLGVPDDWFSARWSCKGGDWKRNEESQDRYSKKKLVLNDGFPLSQMSNYGCEDPRWSRKEDLYYPSHSRKLDIPLWAFCTDELVDCSGTVSRPVQSKFVSVRGVKGNVHSVVRINSCVVKDQGSLVSESHHKTQGKDRYHSRSARPLSSTRDSKRSSSEEDSQSKTVIDQGSQGYCKSVESINISQDHLCAVHDLQLHLGDWYYLDGSGRERGPSTFSDLQSLVDQGIIKKYCSVFRKCDKLWVPVTSSTETLGVHRKSHQESSSVSGEFSEHRSVQSQGVSFGEPHSKSNMFNSIYPQFVGYTRGKLHELVIKSYKSREFAAVINEVLDPWINARQPKKEIEKQIYWKSEGDAHASKRIRVLVDDSEEESNFEDDSFIIENDKSTLEALSGDVTFSAEESGVTISKEEERWGLLDGRMLARVFHFLRSDLKSLVFASMTCKHWKASVKFYKEVSRNVNLSSLGQFCTDSILWNIVNAYEKDKIKSMILMGCTNITADTLEKVFLLFPGLSTVDIRGCNQFEELTPKFTNVKWIKSRNSRITKIADEQHKIRSLKQITDQSSSVSKASSFGIRDNFGELKVYFDSVDKRDTVKQLFRQNLYKRSKLYDARKSSSILSRDARTRRWSIKKSESGYKKMEEFLASRLKEIMKANACDYFVPKVAEIEAKIKRGYYSGHGLSSVKEDISRMCRDAMKAKNRGDANDMNHVISLFIQLATRLEESSKYMNDRDAQLKLWGNDLPLAFCSTSSKYKKNRLVTERKYRSDGIPGGLDNGEYASDREIRRRLSKLNKKSIDSESETSDDLDRSSEDGISDGDTSTSNTDSDQEAHLERRTRESKGNGYFTPSNGLDFITDEREWGARMTKASLVPPVTRKYDVIDQYVIVADEDDVQRKMRVSLPDDYAEKLTAQKNGTEESDMELPEVKDYKPRKRLENEVIEQEVYGIDPYTHNLLLDSMPAELDWSLQEKHVFIEETLLRTLNMQVRHFTGTGSTPMSYPLQPVIQEIERCAEEHRDTRMVSMCQGILKAMDRRPDDKYVAYRKGLGVVCNKEEGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNSKDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVGGHYQIGIYSVRKIQHGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKEWHGILDCHYLMLEACELNSVSEEDYNDLGRAGLGNCLLGGLPDWLVAYAARLVRFINFERTKLPEAILKHNLEEKRKYFSDICLEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCVFGDPMKAPPPIEKLSPEEVVPLLWKGEDSFVEELLQCLTPHVEESTLNDLKSKTRARDPLNSKDIPKAIQKSLLWLRDEVRNLPCTYKCRHDAAADLIHIYAYTKYFFKVVDYKTTTSPPVYISPLDLGPKYADKLGAGFQEYRKIYGQNYCLGQLIFWHNQSDGEPDCTLARASKGSLSLPDISSFYAKAHKPSRQRVYGPKTVRSMLARMEKHPQRPWPKDQIWSFKNSPKFFGSPMLDAVINNTPLDREMVHWLKHRPAIFQAMWDQ 2460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00225 2460 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 470 2460 - -
Vifa6g00225 2460 MobiDBLite consensus disorder prediction 348 370 - -
Vifa6g00225 2460 MobiDBLite consensus disorder prediction 564 585 - -
Vifa6g00225 2460 MobiDBLite consensus disorder prediction 991 1035 - -
Vifa6g00225 2460 ProSiteProfiles SET domain profile. 1887 2030 IPR001214 GO:0005515
Vifa6g00225 2460 MobiDBLite consensus disorder prediction 991 1028 - -
Vifa6g00225 2460 MobiDBLite consensus disorder prediction 751 768 - -
Vifa6g00225 2460 Pfam Protein SET DOMAIN GROUP 2 C-terminal 2041 2460 IPR045606 -
Vifa6g00225 2460 MobiDBLite consensus disorder prediction 454 538 - -
Vifa6g00225 2460 MobiDBLite consensus disorder prediction 742 768 - -
Vifa6g00225 2460 Gene3D SET domain 1894 2061 IPR046341 -
Vifa6g00225 2460 Pfam SET domain 1975 2030 IPR001214 GO:0005515
Vifa6g00225 2460 MobiDBLite consensus disorder prediction 1657 1713 - -
Vifa6g00225 2460 MobiDBLite consensus disorder prediction 348 585 - -
Vifa6g00225 2460 MobiDBLite consensus disorder prediction 291 329 - -
Vifa6g00225 2460 MobiDBLite consensus disorder prediction 1657 1677 - -
Vifa6g00225 2460 SUPERFAMILY SET domain 1905 2053 IPR046341 -
Vifa6g00225 2460 CDD SET_SETD2-like 1904 2052 - -
Vifa6g00225 2460 MobiDBLite consensus disorder prediction 549 563 - -
Vifa6g00225 2460 MobiDBLite consensus disorder prediction 380 442 - -
Vifa6g00225 2460 SMART set_7 1896 2036 IPR001214 GO:0005515
Vifa6g00225 2460 MobiDBLite consensus disorder prediction 130 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00225 Vifa-Chr6 96840635 96858020 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vifa6g00225 SET 7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00225 K22748 - gmx:100781921 3617.39