Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00151 ATGGATGTAACTATTGAGTATCTATACGCAGTTGTTGCCGGAGTTTTAGGCATACTTCTAATTACTTATTCTGCGTTCTTTAGAGGTGAAGCACAAGCACGACCACCTTTAGCTTCTGGTGGATGGCCTTTGATCGGCCACCTTCATCTCCTAGAAGGTGCAAATCAGCCTCCATACATAACCTTAGGAGACTTAGTCGACAAATATGGACCAATTTTCACCCTTCGAATAGGCATACACAAAGCCGTTGTTGTAAGCACTTGGGAGTTAGCCAAGGAGATTTTCACCACTCACGATGTCATAATCTCGTCTCGTCCTAAATTTACCGCCGCTAAAATTCTAGGACACGACTATGCTAATTTTGGATTCTCTCCTTATGGAAATTACTGGCAAATGATGCGTAAGGTCACGGCTTCTGAGTTGTTATCCGTTCGGAGATTCGAGTTGCTTCGAGATATTAGAGACTCGGAGGTGAAGAAATCATTGGCCGAGCTTTATAACAGTGATGGATTTGATGAGTTTGGTGATTTAAAAGTGGAGATGAAACAGTTGTTGGGAGATATGAACTTGAACGTGATTATGAGGATGATTGCTGGGAAGAGATATTCGAGCGATGGTGGTGATGAGAGAGAGGTGAGAAAGGTGAGGTGGGTTTTTAGAGAGTTTTTTAGGTTGACAGGTTTGTTTGTGGTTGGAGATGCGATTCCGTTTCTTGGATGGCTTGATTTGGGAGGACATGTGAAGGATATGAAGAAAGCTGAGCGTGAGATGGATAGTGTTGTCTATGGATGGTTGGAAGAACATCGCAGGAAAAATAATGATTCGGGAGAGATTGCTAAGACTGAGCAGGATTTTATTGATGTCTTGTTGTCTGTTCTTCAAGGTGTTGATCTCGATGGTTATGATCTTGATACTGTCATCAAAGCCACATGCTTGACGTTAATTGCCGGGGCAACAGACACAACAACAGTAACCATAACATGGGCACTCTCATTACTGCTAAACAATCGCCACACATTGAAGAAAGTTCAAGATGAATTAGATGAAAAAGTTGGGAAAGAAAGGCTAGTGAATGAATCTGACATAAACAACTTAGTTTACCTTCAAGCTGTGGTGAAAGAAACACTGCGATTATATCCTGCTGGACCACTCTCAGGTGCACGTCAATTCACCGAAAATTGCACCGTAGGCGGATACCATATTGAAACAGGTACTAGACTGATTTTGAACCTTTGGAAGATGCATAGAGATCCACGCGTGTGGTCGGAACCATTAGAGTTTCAACCAGAAAGGTTTTTGAATACTCATAAGGATGTTGATGTTAAAGGACAACATTATGAGCTGCTTCCGTTTGGAGGTGGAAGAAGGTCTTGTCCTGGTATAACATTTGGTCTTCAAATGACACATTTGGCATTAGCTGCTTTCTTGCAAGCGTTTGAAATCACAACCCCGTTGAATGGTAATGTTGATATGAGTGCAACGTTTGGACTCACAAACATCAAAACCACGCCACTAGAGGTTATAGCCAAACCTCGGTTGCCATACGAGCTCTTTGTTAGTTAA 1563 0.4216 MDVTIEYLYAVVAGVLGILLITYSAFFRGEAQARPPLASGGWPLIGHLHLLEGANQPPYITLGDLVDKYGPIFTLRIGIHKAVVVSTWELAKEIFTTHDVIISSRPKFTAAKILGHDYANFGFSPYGNYWQMMRKVTASELLSVRRFELLRDIRDSEVKKSLAELYNSDGFDEFGDLKVEMKQLLGDMNLNVIMRMIAGKRYSSDGGDEREVRKVRWVFREFFRLTGLFVVGDAIPFLGWLDLGGHVKDMKKAEREMDSVVYGWLEEHRRKNNDSGEIAKTEQDFIDVLLSVLQGVDLDGYDLDTVIKATCLTLIAGATDTTTVTITWALSLLLNNRHTLKKVQDELDEKVGKERLVNESDINNLVYLQAVVKETLRLYPAGPLSGARQFTENCTVGGYHIETGTRLILNLWKMHRDPRVWSEPLEFQPERFLNTHKDVDVKGQHYELLPFGGGRRSCPGITFGLQMTHLALAAFLQAFEITTPLNGNVDMSATFGLTNIKTTPLEVIAKPRLPYELFVS 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00151 520 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00151 520 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00151 520 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00151 520 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00151 520 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00151 520 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00151 520 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00151 520 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00151 520 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00151 520 SUPERFAMILY Cytochrome P450 41 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00151 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Vifa6g00151 520 PANTHER CYTOCHROME P450 82C3-RELATED 17 517 - -
Vifa6g00151 520 FunFam Cytochrome P450 82C4 27 510 - -
Vifa6g00151 520 CDD CYP82 70 512 - -
Vifa6g00151 520 Gene3D Cytochrome P450 30 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00151 520 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00151 520 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00151 520 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00151 520 Pfam Cytochrome P450 36 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00151 Vifa-Chr6 62537181 62561153 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00151 8 519 Cytochrome P450 AT4G31940 47.701 1.95e-172 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00151 - - gmx:100810391 759.599