Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00146 ATGGCTTCTGGATCGTCTCGTCACGGTAACCCCGCTTCTAAAGGCTTTGATTTTGCTTCTGATGATATCTTATGCTCCTACGAAGACTTCTCCAACAGGGATTCCAATTCCAATGGCAATCACAACGATCCTGTAATCGCCCCTAATTCAACCAAGGATTTTCACAAATCAAGGGTAGCAAGGACACCCGTTTTTCCTTCTACTGCCTATAATCCACCTGAAGACTTTTTAAGCCAAGACGTGATTGCAACTGTGGAGAACAGTATGAAGAAATATGCCGACAACCTCATGCGTTTTCTTGAGGGGATTAGTTCTAGGCTATCACAGTTGGAGTTATATTGCTACAATCTTGACAAATCTATCGGAGAAATCAGATCTGATTTAAATCGTGATCATGGGGAGCAAGATTCAAAGCTCAAATCTCTTGAAAAGCATCTTCAGGAATTTGCTATAGCTCTGTTGCATAAAGACAGATTTGTACCCATATTAGAGTTATTAATCCCGGATAGCAAAGCGGAGCGGCCGACCCCAAAAGTGGGTTAA 543 0.4217 MASGSSRHGNPASKGFDFASDDILCSYEDFSNRDSNSNGNHNDPVIAPNSTKDFHKSRVARTPVFPSTAYNPPEDFLSQDVIATVENSMKKYADNLMRFLEGISSRLSQLELYCYNLDKSIGEIRSDLNRDHGEQDSKLKSLEKHLQEFAIALLHKDRFVPILELLIPDSKAERPTPKVG 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00146 180 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 5 148 - -
Vifa6g00146 180 MobiDBLite consensus disorder prediction 32 47 - -
Vifa6g00146 180 MobiDBLite consensus disorder prediction 32 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00146 Vifa-Chr6 59674661 59675581 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00146 81 158 Trihelix Transcription Factor Family AT5G14540 33.750 1.04e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00146 - - adu:107478128 257.684