Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00145 ATGGCTTCTGGATCGTCTCGTCACGGTAACCCCGCTTCTAAAGGCTTTGATTTTGCTTCTGATGATATCTTATGCTCCTACGAAGACTTCTCCAACAGGGATTCCAATTCCAATGGCAATCACAACGATCCTGATTTTCACAAATCAAGGGTAGCAAGGACACCCGTTTTTCCTTCTACTGCCTATAATCCACCTGAAGACTTTTTAAGCCAAGACGTGATTGCAACTGTGGAGAACAGTATGAAGAAATATGCCGACAACCTCATGCGTTTTCTTGAGGGGATTAGTTCTAGGCTATCACAGTTGGAGTTATATTGCTACAATCTTGACAAATCTATCGGAGAAATCAGATCTGATTTAAATCGTGATCATGGGGAGCAAGATTCAAAGCTCAAATCTCTTGAAAAGCATCTTCAGGAATTTGCTATAGCTCTGTTGCATAAAGACAGATTTGTACCCATATTAGAGTTATTAATCCCGGATAGCAAAGCGGAGCGGCCGACCCCAAAAGTGGGTTAA 519 0.42 MASGSSRHGNPASKGFDFASDDILCSYEDFSNRDSNSNGNHNDPDFHKSRVARTPVFPSTAYNPPEDFLSQDVIATVENSMKKYADNLMRFLEGISSRLSQLELYCYNLDKSIGEIRSDLNRDHGEQDSKLKSLEKHLQEFAIALLHKDRFVPILELLIPDSKAERPTPKVG 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00145 172 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 5 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00145 Vifa-Chr6 59674661 59675581 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00145 73 150 Trihelix Transcription Factor Family AT5G14540 32.911 8.64e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00145 - - gmx:100782994 250.366