Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00144 ATGGGTAGAGGGATAGCAGCAAACTTCCGTGTTTTGAGGAAGGGAAGGGAAAAGGGAAAACAGCTAAGCCTTGTTAATTTAAGCGAATACACATCATGTGCAGATTTAAACGAATACACATCATGTGCATATCTGCATGTTCACCGGTCAGTACAAATTTTAAGAGACAAGCAAGAGTTAGCTGAGACTCAGAAAGAACTAGCCAAGCTTCAACTTGCTCAGAAGGAATCATCTTCCTCAAACCCTTCACAGTCCAATGAGGACAGATCCTCACCTGCAGATCCTAAAAAAACTGATAATGCATCTGATGCGAACAACCATCAGTTAGCTCTTGCCCTGCCTCATCAAGTTGCTCCTCAGCAGCAGCCTGCAGGAACCCCGGCCCAAGCTCCACCACCAAATGTGAATCAACCCACTCAACAACCTGCTTATTACATGCCGCCTGCTCCTGCAGCGTCTCAGCTCCCCCAGAATCAATATATGCCTTCTGATCAACAATACCGAACCCCCCAACTACAAGACATGTCCCGGGTGGCTCCACAACCAACACCATCTCAAATAAACCCTCCCACACCTGTGCAACAATTTTCTCAGTATCAGCAGCAGCCGCAGCAGCAGCAATGGCCTCAGCAGGGTCAACAACCCTCAATGCAACCTCAAATGAGACCCCCCTCATCAACTGTGTATCCTCCATACCAGCCAAGCCAAGTATCAAATCCATCATCCACAGATACACAGCCAACCAGCATGCCCATGCAAATGCCATACTCAGGGGTTCCGCAACCAGGATCCAGCCGTGCTGATTCCATGCAATATGGATATGGTGGAACTGGTAGAACAGTTCCCCAGCAACCCCAACCCCAGCAAATCAAGAGCACATTTCCTTCACAACCAGGTGACGTGTATGGAGCTGGTGGGACACACCAGACACTCCCCCCTTCTCCTGGTAATGCATACATGATGTATGATGGTGGTGAGGGAGGAAGGACACATCATCCACCACCTCAACCCTCACATTTTGCTCAATCTGGATATCCTCCAACAAGTGCTTCCCTTCAGAACCCTAATCTCATGGTTCGAAATCCTAGCCAGTCACAGTTTGTGCGCAATCATCCTTACAATGAGTTGATTGAGAAATTGGTGAACATGGGATTCAGGGGTGACCATGTGGCGAGTGTGATACAAAGGATGGAGGAAAGTGGACAAACCATAGATTTCAATTCTGTTCTTGATAGGTTGAGCGTGCATAGCTCTGTTGCCCCCCAGAGAGGATGGTCAGGGTGA 1284 0.4844 MGRGIAANFRVLRKGREKGKQLSLVNLSEYTSCADLNEYTSCAYLHVHRSVQILRDKQELAETQKELAKLQLAQKESSSSNPSQSNEDRSSPADPKKTDNASDANNHQLALALPHQVAPQQQPAGTPAQAPPPNVNQPTQQPAYYMPPAPAASQLPQNQYMPSDQQYRTPQLQDMSRVAPQPTPSQINPPTPVQQFSQYQQQPQQQQWPQQGQQPSMQPQMRPPSSTVYPPYQPSQVSNPSSTDTQPTSMPMQMPYSGVPQPGSSRADSMQYGYGGTGRTVPQQPQPQQIKSTFPSQPGDVYGAGGTHQTLPPSPGNAYMMYDGGEGGRTHHPPPQPSHFAQSGYPPTSASLQNPNLMVRNPSQSQFVRNHPYNELIEKLVNMGFRGDHVASVIQRMEESGQTIDFNSVLDRLSVHSSVAPQRGWSG 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00144 427 MobiDBLite consensus disorder prediction 152 182 - -
Vifa6g00144 427 MobiDBLite consensus disorder prediction 71 102 - -
Vifa6g00144 427 MobiDBLite consensus disorder prediction 326 354 - -
Vifa6g00144 427 Coils Coil 53 73 - -
Vifa6g00144 427 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 47 427 - -
Vifa6g00144 427 MobiDBLite consensus disorder prediction 190 223 - -
Vifa6g00144 427 MobiDBLite consensus disorder prediction 116 293 - -
Vifa6g00144 427 MobiDBLite consensus disorder prediction 71 89 - -
Vifa6g00144 427 Pfam UBA-like domain (DUF1421) 373 417 IPR010820 -
Vifa6g00144 427 MobiDBLite consensus disorder prediction 231 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00144 Vifa-Chr6 59669548 59671320 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00144 372 427 Trihelix Transcription Factor Family AT5G14540 37.500 4.07e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00144 - - gmx:100810231 481.1