Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00136 ATGTCCAGCAACCAGCACAATATCAGTTCCGCTTCTTATGGTGCCACATGGAGAACCCTCCGCCGTAACCTGGCCTCCGAGATGCTCCATCCGGCGAAAGTCAAATCTTTCTCAGAAATCCGGAACTGGGTCCTTGACACTCTCATCAACCGTCTCAAAACGGCTTCGGAGTCTGAATCCTTTATGGCTATTCCCCACTTTCATTATGCAATGTTCTGTTTACTTGTTTTTATGTGTTTTGGTGAAAGAGTTAGCGATGAGAAAGTTAATGAAATTGAACGCGTACAAAGGACGCTTCTGTTGAGTATGAGCAGATTCAATATATTGAATTTCTGGCCTCAAGTTACTAAGATTTTGCTCAGGAAAAGATGGGAGGAGTTGTTGAAGTTGCGTAAGGGTCAGGAAGATGTTTTACTTCCGCTGATAAGAGCCAGGAAGCAAAATAAGGGAAGTAAGAGTGTTGTTTCTTATGCGGATACTCTCTTGGAGTTGGAGTTAAAGGAGGAGAATCACAAGTTGAATGAAGATGAAATGAGAAAGCTTGTGGAGGAGATTAGGGAGGTAATTGGTGGTGATGATAGTGGATTGACCAAGATAGTGGCACCTGGCAGTGAAACTTTGGGTGGTGTAATTGGTGCTTTCCAACACATGATACGAACTGAAGGCATCTTTTCTCTATACAAGGGTTTAGTACCGTCACTTATAAGCATAGCTCCTTCTAGTGCTGTTTTTTATGGTGTATATGATATGCTAAAATCATCTTATCTGCATTCACCCGAAGGAATGCAAAGAACCCAGAATTTGAATAAACAGGGTCAGAAACTGAGTGCCTTTGATCAGCTTGAGTTGGGGCCAGTAAGGACATTGTTGTATGGGGATATTGCTGGTGTATGTGCAGAAGCTGCTACGTACCCGTTCGAAGTTGTGAGAAGGCAGCTTCAATTCTTATTACAGTCAAATATGACTACTGACAAAGGAGTAGATGGTTCTGATGCATCCTTTTCCATTTCCATGGCCGAAAATCAACCTCAAAATAATCTACCGATGCCTATAACAAATCCACCTCAAACTATTGATTTGGACAATGTTCATACTAGTAAATGA 1104 0.4185 MSSNQHNISSASYGATWRTLRRNLASEMLHPAKVKSFSEIRNWVLDTLINRLKTASESESFMAIPHFHYAMFCLLVFMCFGERVSDEKVNEIERVQRTLLLSMSRFNILNFWPQVTKILLRKRWEELLKLRKGQEDVLLPLIRARKQNKGSKSVVSYADTLLELELKEENHKLNEDEMRKLVEEIREVIGGDDSGLTKIVAPGSETLGGVIGAFQHMIRTEGIFSLYKGLVPSLISIAPSSAVFYGVYDMLKSSYLHSPEGMQRTQNLNKQGQKLSAFDQLELGPVRTLLYGDIAGVCAEAATYPFEVVRRQLQFLLQSNMTTDKGVDGSDASFSISMAENQPQNNLPMPITNPPQTIDLDNVHTSK 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00136 367 SUPERFAMILY Cytochrome P450 9 194 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00136 367 SUPERFAMILY Mitochondrial carrier 206 316 IPR023395 -
Vifa6g00136 367 Coils Coil 164 184 - -
Vifa6g00136 367 MobiDBLite consensus disorder prediction 341 367 - -
Vifa6g00136 367 PRINTS Mitochondrial carrier protein signature 292 314 IPR002067 GO:0055085
Vifa6g00136 367 PRINTS Mitochondrial carrier protein signature 227 245 IPR002067 GO:0055085
Vifa6g00136 367 ProSiteProfiles Solute carrier (Solcar) repeat profile. 182 254 IPR018108 -
Vifa6g00136 367 Gene3D Cytochrome P450 1 181 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00136 367 Gene3D Mitochondrial carrier domain 182 337 IPR023395 -
Vifa6g00136 367 PANTHER SOLUTE CARRIER FAMILY 25 205 315 - -
Vifa6g00136 367 Pfam Cytochrome P450 6 184 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00136 367 Pfam Mitochondrial carrier protein 207 256 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00136 Vifa-Chr6 51788434 51790612 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00136 1 199 Cytochrome P450 AT1G64950 51.887 1.51e-68 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00136 K24184 - gmx:100792037 234.187