Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00135 ATGTCCAGCAACCAGCACAATATCAGTTCCGCTTCTTATGGTGCCACATGGAGAACCCTCCGCCGTAACCTGGCCTCCGAGATGCTCCATCCGGCGAAAGTCAAATCTTTCTCAGAAATCCGGAACTGGGTCCTTGACACTCTCATCAACCGTCTCAAAACGGCTTCGGAGTCTGAATCCTTTATGGCTATTCCCCACTTTCATTATGCAATGTTCTGTTTACTTGTTTTTATGTGTTTTGGTGAAAGAGTTAGCGATGAGAAAGTTAATGAAATTGAACGCGTACAAAGGACGCTTCTGTTGAGTATGAGCAGATTCAATATATTGAATTTCTGGCCTCAAGTTACTAAGATTTTGCTCAGGAAAAGATGGGAGGAGTTGTTGAAGTTGCGTAAGGGTCAGGAAGATGTTTTACTTCCGCTGATAAGAGCCAGGAAGCAAAATAAGGGAAGTAAGAGTGTTGTTTCTTATGCGGATACTCTCTTGGAGTTGGAGTTAAAGGAGGAGAATCACAAGTTGAATGAAGATGAAATGAGAAAGCTTGTGGAGGAGATTAGGGAGGTAATTGGTGGTGATGATAGTGGATTGACCAAGATAGTGGCACCTGGCAGTGAAACTTTGGGTGGTGTAATTGGTGCTTTCCAACACATGATACGAACTGAAGGCATCTTTTCTCTATACAAGGGTTTAGTACCGTCACTTATAAGCATAGCTCCTTCTAGTGCTGTTTTTTATGGTGTATATGATATGCTAAAATCATCTTATCTGCATTCACCCGAAGGAATGCAAAGAACCCAGAATTTGAATAAACAGGGTCAGAAACTGAGTGCCTTTGATCAGCTTGAAAGCTGCTACGTACCCGTTCGAAGTTGTGAGAAGGCAGCTTCAATTTCAAATATGACTACTGACAAAGGAGTAGATGGTTCTGATGCATCCTTTTCCATTTCCATGGCCGAAAATCAACCTCAAAATAATCTACCGATGCCTATAACAAATCCACCTCAAACTATTGATTTGGACAATGTTCATACTAGTAAATGA 1041 0.4159 MSSNQHNISSASYGATWRTLRRNLASEMLHPAKVKSFSEIRNWVLDTLINRLKTASESESFMAIPHFHYAMFCLLVFMCFGERVSDEKVNEIERVQRTLLLSMSRFNILNFWPQVTKILLRKRWEELLKLRKGQEDVLLPLIRARKQNKGSKSVVSYADTLLELELKEENHKLNEDEMRKLVEEIREVIGGDDSGLTKIVAPGSETLGGVIGAFQHMIRTEGIFSLYKGLVPSLISIAPSSAVFYGVYDMLKSSYLHSPEGMQRTQNLNKQGQKLSAFDQLESCYVPVRSCEKAASISNMTTDKGVDGSDASFSISMAENQPQNNLPMPITNPPQTIDLDNVHTSK 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00135 346 Coils Coil 164 184 - -
Vifa6g00135 346 Pfam Mitochondrial carrier protein 207 256 IPR018108 -
Vifa6g00135 346 Pfam Cytochrome P450 6 184 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00135 346 MobiDBLite consensus disorder prediction 322 346 - -
Vifa6g00135 346 SUPERFAMILY Cytochrome P450 9 194 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g00135 346 SUPERFAMILY Mitochondrial carrier 206 257 IPR023395 -
Vifa6g00135 346 ProSiteProfiles Solute carrier (Solcar) repeat profile. 182 254 IPR018108 -
Vifa6g00135 346 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 182 - -
Vifa6g00135 346 Gene3D Cytochrome P450 1 206 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00135 Vifa-Chr6 51788434 51790612 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00135 1 199 Cytochrome P450 AT1G64950 51.887 7.19e-69 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00135 K24184 - gmx:100792037 234.187